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中国西北地区分离株的流行病学和遗传特征

Epidemiology and genetic characteristics of isolates in Northwest China.

作者信息

Li Yang, An Shujuan, Sun Hongjia, Hu Meimei, Xu Yanmei, Xi Yaming

机构信息

Department of Laboratory Medicine, The First Hospital of Lanzhou University, Lanzhou, Gansu, China.

The First Clinical Medical College, Lanzhou University, Lanzhou, Gansu, China.

出版信息

PeerJ. 2025 Aug 15;13:e19877. doi: 10.7717/peerj.19877. eCollection 2025.

Abstract

is a significant hospital-acquired pathogen that can cause antibiotic-associated diarrhea. In this study, we investigate the epidemiological and genetic characteristics of isolates from a tertiary hospital in Northwest China. We prospectively collected fecal samples from 212 patients with diarrhea between January 2023 and May 2024 at the First Hospital of Lanzhou University. Twenty-five (11.8%, 25/212) strains of were isolated, and twenty (9.4%, 20/212) were identified as toxigenic (TCD). The dominant toxin gene profiles were + + (80%, 20/25). Furthermore, twelve different sequence types (STs) belonging to three clades were identified, and the most prevalent types were ST3 followed by ST2 and ST35. Toxin variant analysis revealed the presence of eight types of variants and seven types of variants, most variants corresponded to specific ST types. Phylogenetic analysis based on single nucleotide polymorphisms (SNPs) further confirmed the genetic diversity and relationships among isolates. We identified 13 resistance genes, including mutations in (96% of strains) and (72%), conferring resistance to fluoroquinolones and rifamycins, respectively. The study provides valuable insights into the epidemiological and genetic features of in Northwest China, guiding future prevention and control measures.

摘要

是一种重要的医院获得性病原菌,可引起抗生素相关性腹泻。在本研究中,我们调查了来自中国西北一家三级医院的分离株的流行病学和遗传特征。我们前瞻性地收集了2023年1月至2024年5月期间兰州大学第一医院212例腹泻患者的粪便样本。分离出25株(11.8%,25/212)菌株,其中20株(9.4%,20/212)被鉴定为产毒型(TCD)。主要的毒素基因谱为++(80%,20/25)。此外,鉴定出属于三个进化枝的12种不同序列类型(STs),最常见的类型是ST3,其次是ST2和ST35。毒素变异分析显示存在8种类型的变异和7种类型的变异,大多数变异对应特定的ST类型。基于单核苷酸多态性(SNP)的系统发育分析进一步证实了分离株之间的遗传多样性和关系。我们鉴定出13个耐药基因,包括(96%的菌株)和(72%)的突变,分别赋予对氟喹诺酮类和利福霉素类的耐药性。该研究为中国西北地区的流行病学和遗传特征提供了有价值的见解,指导未来的预防和控制措施。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c64f/12360323/1bb0ae8ed276/peerj-13-19877-g001.jpg

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