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用于人类胚胎形态动力学阶段检测的精确机器学习模型。

Accurate machine learning model for human embryo morphokinetic stage detection.

作者信息

Misaghi Hooman, Cree Lynsey, Knowlton Nicholas

机构信息

Department of Obstetrics, Gynaecology and Reproductive Sciences, University of Auckland, Auckland, New Zealand.

School of Mathematical and Computational Sciences, Massey University, Albany, New Zealand.

出版信息

J Assist Reprod Genet. 2025 Aug 20. doi: 10.1007/s10815-025-03585-4.

DOI:10.1007/s10815-025-03585-4
PMID:40833447
Abstract

PURPOSE

The ability to detect, monitor, and precisely time the morphokinetic stages of human pre-implantation embryo development plays a critical role in assessing their viability and potential for successful implantation. Therefore, there is a need for accurate and accessible tools to analyse embryos. This work describes a highly accurate, machine learning model designed to predict 17 morphokinetic stages of pre-implantation human development, an improvement on existing models. This model provides a robust tool for researchers and clinicians, enabling the automation of morphokinetic stage prediction, standardising the process, and reducing subjectivity between clinics.

METHOD

A computer vision model was built on a publicly available dataset for embryo Morphokinetic stage detection. The dataset contained 273,438 labelled images based on Embryoscope/ + © embryo images. The dataset was split 70/10/20 into training/validation/test sets. Two different deep learning architectures were trained and tested, one using EfficientNet-V2-Large and the other using EfficientNet-V2-Large with the addition of fertilisation time as input. A new postprocessing algorithm was developed to reduce noise in the predictions of the deep learning model and detect the exact time of each morphokinetic stage change.

RESULTS

The proposed model reached an overall test F1-score of 0.881 and accuracy of 87% across 17 morphokinetic stages on an independent test set.

CONCLUSION

The proposed model shows a 17% accuracy improvement, compared to the best models on the same dataset. Therefore, our model can accurately detect morphokinetic stages in static embryo images as well as detecting the exact timings of stage changes in a complete time-lapse video.

摘要

目的

检测、监测并精确计时人类植入前胚胎发育的形态动力学阶段的能力,在评估其生存能力和成功植入的潜力方面起着关键作用。因此,需要准确且易于使用的工具来分析胚胎。这项工作描述了一种高度准确的机器学习模型,旨在预测人类植入前发育的17个形态动力学阶段,是对现有模型的改进。该模型为研究人员和临床医生提供了一个强大的工具,能够实现形态动力学阶段预测的自动化,使过程标准化,并减少不同诊所之间的主观性。

方法

基于公开可用的胚胎形态动力学阶段检测数据集构建了一个计算机视觉模型。该数据集包含基于Embryoscope/ + ©胚胎图像的273,438张标注图像。数据集按70/10/20划分为训练/验证/测试集。对两种不同的深度学习架构进行了训练和测试,一种使用EfficientNet-V2-Large,另一种在EfficientNet-V2-Large的基础上增加受精时间作为输入。开发了一种新的后处理算法,以减少深度学习模型预测中的噪声,并检测每个形态动力学阶段变化的确切时间。

结果

在独立测试集上,所提出的模型在17个形态动力学阶段的总体测试F1分数达到0.881,准确率达到87%。

结论

与同一数据集上的最佳模型相比,所提出的模型准确率提高了17%。因此,我们的模型能够准确检测静态胚胎图像中的形态动力学阶段,以及在完整的延时视频中检测阶段变化的确切时间。

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本文引用的文献

1
Delineating the heterogeneity of embryo preimplantation development using automated and accurate morphokinetic annotation.利用自动化和准确的形态动力学注释来描绘胚胎植入前发育的异质性。
J Assist Reprod Genet. 2023 Jun;40(6):1391-1406. doi: 10.1007/s10815-023-02806-y. Epub 2023 Jun 10.
2
Novel Time-Lapse Parameters Correlate with Embryo Ploidy and Suggest an Improvement in Non-Invasive Embryo Selection.新型延时参数与胚胎倍性相关,并提示无创胚胎选择的改进。
J Clin Med. 2023 Apr 19;12(8):2983. doi: 10.3390/jcm12082983.
3
Does embryo categorization by existing artificial intelligence, morphokinetic or morphological embryo selection models correlate with blastocyst euploidy rates?
现有的人工智能、形态动力学或形态学胚胎选择模型对胚胎进行分类是否与囊胚整倍体率相关?
Reprod Biomed Online. 2023 Feb;46(2):274-281. doi: 10.1016/j.rbmo.2022.09.010. Epub 2022 Oct 1.
4
Embryologist agreement when assessing blastocyst implantation probability: is data-driven prediction the solution to embryo assessment subjectivity?胚胎学家在评估囊胚着床概率时的意见一致:数据驱动的预测是否是解决胚胎评估主观性的方法?
Hum Reprod. 2022 Sep 30;37(10):2275-2290. doi: 10.1093/humrep/deac171.
5
Investigation of the reliability of semi-automatic annotation by the Geri time-lapse system.利用 Geri 延时系统评估半自动标注的可靠性。
Reprod Biomed Online. 2022 Jul;45(1):35-45. doi: 10.1016/j.rbmo.2022.02.012. Epub 2022 Feb 23.
6
Embryo Ranking Intelligent Classification Algorithm (ERICA): artificial intelligence clinical assistant predicting embryo ploidy and implantation.胚胎分级智能分类算法(ERICA):人工智能临床助手预测胚胎倍性和着床。
Reprod Biomed Online. 2020 Oct;41(4):585-593. doi: 10.1016/j.rbmo.2020.07.003. Epub 2020 Jul 5.
7
Consistency and objectivity of automated embryo assessments using deep neural networks.使用深度神经网络进行胚胎自动评估的一致性和客观性。
Fertil Steril. 2020 Apr;113(4):781-787.e1. doi: 10.1016/j.fertnstert.2019.12.004.
8
Development of automated annotation software for human embryo morphokinetics.人类胚胎形态动力学自动注释软件的开发。
Hum Reprod. 2020 Mar 27;35(3):557-564. doi: 10.1093/humrep/deaa001.
9
Development of a generally applicable morphokinetic algorithm capable of predicting the implantation potential of embryos transferred on Day 3.开发一种能够预测第3天移植胚胎着床潜力的通用形态动力学算法。
Hum Reprod. 2016 Oct;31(10):2231-44. doi: 10.1093/humrep/dew188. Epub 2016 Sep 8.
10
Assessment of human embryo development using morphological criteria in an era of time-lapse, algorithms and 'OMICS': is looking good still important?在延时成像、算法和“组学”时代,使用形态学标准评估人类胚胎发育:外观良好仍然重要吗?
Mol Hum Reprod. 2016 Oct;22(10):704-718. doi: 10.1093/molehr/gaw057. Epub 2016 Aug 30.