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探索泰国安达曼红树林中的蓝细菌:采用多相方法对荒漠丝菌属、玫瑰丝菌属、虎纹丝菌属和佩尔西内马属新物种的描述。

Exploring cyanobacteria from the Andaman mangroves of Thailand: Descriptions of new species of Desertifilum, Roseofilum, Tigrinifilum, and Persinema using a polyphasic approach.

作者信息

Ginn Billy Lim Chun, Praiboon Jantana, Merican Faradina, Maneekat Sinchai, Zeng Cong, Zuccarello Giuseppe C, Muangmai Narongrit

机构信息

Department of Fishery Biology, Faculty of Fisheries, Kasetsart University, Bangkok, Thailand.

School of Biological Sciences, Universiti Sains Malaysia, Penang, Malaysia.

出版信息

J Phycol. 2025 Aug 25. doi: 10.1111/jpy.70074.

Abstract

Non-heterocytous filamentous cyanobacteria are increasingly recognized as abundant and diverse microbial components of tropical and subtropical mangrove ecosystems. However, taxonomic studies of cyanobacteria in Thailand have largely focused on freshwater and artificial hypersaline environments, leaving mangrove-associated cyanobacterial communities understudied. In this polyphasic study, cyanobacterial mats were isolated and characterized from mangrove environments along the Andaman coastlines of Ranong and Phang-Nga provinces. Comparative analysis of morphology, salinity tolerance, habitat preference, 16S rRNA gene phylogeny and genetic similarity, 16S-23S ITS rRNA region phylogeny, secondary structure and percent dissimilarity supported the descriptions of Desertifilum andamanense sp. nov., Tigrinifilum phangngense sp. nov., Roseofilum epilithicum sp. nov., and Persinema corticola sp. nov., while justifying the continued recognition of D. fontinale and D. tharense. Two divergent ITS rRNA region operons in T. floridanum with different leader motifs, D1-D1', and D2 regions proved to be useful diagnostic markers of the ITS rRNA region for species and strain differentiation within Tigrinifilum. Our results underscore the importance of a polyphasic approach that also considers intragenomic ITS rRNA region variation to ensure robust and accurate taxonomic assessments of cyanobacteria. This study also provides records of the genera Desertifilum, Roseofilum, Tigrinifilum, and Persinema in Thailand, contributing to a more comprehensive understanding of the nation's diversity and biogeography of cyanobacteria.

摘要

非异形丝状蓝细菌日益被认为是热带和亚热带红树林生态系统中丰富多样的微生物组成部分。然而,泰国蓝细菌的分类研究主要集中在淡水和人工高盐环境,红树林相关的蓝细菌群落研究较少。在这项多相研究中,从拉廊府和攀牙府安达曼海岸线的红树林环境中分离并鉴定了蓝细菌垫。通过对形态、耐盐性、栖息地偏好、16S rRNA基因系统发育和遗传相似性、16S-23S ITS rRNA区域系统发育、二级结构和差异百分比的比较分析,支持了新种安达曼沙漠丝菌、新种攀牙虎纹丝菌、新种附石玫瑰丝菌和新种树皮栖栖丝菌的描述,同时证明了继续认可Fontinale沙漠丝菌和Tharense沙漠丝菌的合理性。佛罗里达虎纹丝菌中两个具有不同前导基序D1-D1'和D2区域的不同ITS rRNA区域操纵子被证明是虎纹丝菌属内物种和菌株分化的ITS rRNA区域的有用诊断标记。我们的结果强调了多相方法的重要性,该方法还考虑基因组内ITS rRNA区域变异,以确保对蓝细菌进行稳健和准确的分类评估。这项研究还提供了泰国沙漠丝菌属、玫瑰丝菌属、虎纹丝菌属和栖丝菌属的记录,有助于更全面地了解该国蓝细菌的多样性和生物地理学。

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