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[物种名称]中基因家族的全基因组鉴定与表达分析 。(原文中“in.”后缺少具体物种名称,翻译时根据实际情况补充“[物种名称]”)

Genome-Wide Identification and Expression Analysis of the Gene Families in .

作者信息

Du Haijing, Zhou Jianqiang, Liang Xiaoran, Chen Yufei, Liu Xiaohui, Zhen Cheng, Zhang Hong, Xiao Jiaxin, Gao Xuan

机构信息

Anhui Provincial Key Laboratory of Molecular Enzymology and Mechanism of Major Metabolic Diseases, College of Life Sciences, Anhui Normal University, Wuhu 241000, China.

Anhui Provincial Engineering Research Centre for Molecular Detection and Diagnostics, College of Life Sciences, Anhui Normal University, Wuhu 241000, China.

出版信息

Int J Mol Sci. 2025 Aug 13;26(16):7835. doi: 10.3390/ijms26167835.

DOI:10.3390/ijms26167835
PMID:40869157
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12386343/
Abstract

The gene family is a widely distributed and highly conserved transcription factor (TF) family in plants, with its members playing key roles in plant growth and development, stress response, and metabolism. Although TFs have been extensively studied in many plant species, research on the gene family in Thunb. remains limited. Therefore, integrating molecular biology and bioinformatics approaches to further explore the gene family in is of considerable scientific importance. In this study, we employed various online tools to obtain genomic and expression data, which were subsequently analyzed to determine the composition, evolutionary relationships, and functions of family genes in . A total of 66 genes () were identified, named based on homology alignment. Phylogenetic analysis classified the 66 into three major clades and seven subclades. Sequence and structural analyses of genes provided insights into their evolutionary and functional characteristics. Expression profile analysis revealed significant differences in the expression of 12 genes at various stages of fruit development. Protein interaction analysis further indicated that genes are functionally diverse, playing important roles in stress response, seed germination regulation, and plant growth and development. In summary, we have a deeper understanding of genes, and systematic analysis of structure, evolutionary characteristics, and expression patterns plays an important role in analyzing its biological functions, molecular breeding, and enhancing economic value.

摘要

该基因家族是植物中广泛分布且高度保守的转录因子(TF)家族,其成员在植物生长发育、应激反应和新陈代谢中发挥着关键作用。尽管转录因子在许多植物物种中已得到广泛研究,但对[植物名称]中该基因家族的研究仍然有限。因此,整合分子生物学和生物信息学方法来进一步探索[植物名称]中的该基因家族具有相当重要的科学意义。在本研究中,我们利用各种在线工具获取基因组和表达数据,随后对其进行分析以确定[植物名称]中该家族基因的组成、进化关系和功能。共鉴定出66个[基因名称]基因([具体基因名称]),基于同源比对进行命名。系统发育分析将这66个基因分为三个主要分支和七个亚分支。对[基因名称]基因的序列和结构分析揭示了它们的进化和功能特征。表达谱分析显示12个[基因名称]基因在果实发育的各个阶段表达存在显著差异。蛋白质相互作用分析进一步表明[基因名称]基因功能多样,在应激反应、种子萌发调控以及植物生长发育中发挥重要作用。总之,我们对[基因名称]基因有了更深入的了解,对其结构、进化特征和表达模式的系统分析在分析其生物学功能、分子育种以及提高经济价值方面发挥着重要作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b54e/12386343/7c4ab114e4f1/ijms-26-07835-g009a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b54e/12386343/bd56c8dd150a/ijms-26-07835-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b54e/12386343/601e25650bd3/ijms-26-07835-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b54e/12386343/6707938c508d/ijms-26-07835-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b54e/12386343/e761f04f595a/ijms-26-07835-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b54e/12386343/6a71b418ae25/ijms-26-07835-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b54e/12386343/85015a61a19d/ijms-26-07835-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b54e/12386343/d4def30a7171/ijms-26-07835-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b54e/12386343/803a26bac24f/ijms-26-07835-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b54e/12386343/7c4ab114e4f1/ijms-26-07835-g009a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b54e/12386343/bd56c8dd150a/ijms-26-07835-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b54e/12386343/601e25650bd3/ijms-26-07835-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b54e/12386343/6707938c508d/ijms-26-07835-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b54e/12386343/e761f04f595a/ijms-26-07835-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b54e/12386343/6a71b418ae25/ijms-26-07835-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b54e/12386343/85015a61a19d/ijms-26-07835-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b54e/12386343/d4def30a7171/ijms-26-07835-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b54e/12386343/803a26bac24f/ijms-26-07835-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b54e/12386343/7c4ab114e4f1/ijms-26-07835-g009a.jpg

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