Chen Runan, Feng Yalan, Zhou Jin, Wang Ying, Zhang Fengyi, Rehman Shazia, Yang Zhuang, Lao Zifen, Xu Hang, Xiao Yong, Luo Jie, Xia Wei
State Key Laboratory of Topical Crop Breeding, School of Breeding and Multiplication (Sanya Institute of Breeding and Multiplication)/School of Tropical Agriculture and Forestry, Hainan University, Sanya 572025, China.
Plants (Basel). 2025 Aug 14;14(16):2532. doi: 10.3390/plants14162532.
() is a critical transcription factor that plays a significant role in regulating plant growth and development. Mining the coconut SPL family offers valuable insights into the regulation of important agronomic traits, including the length of the juvenile phase. In this study, 25 were identified and were classified into eight subfamilies. Analysis of gene structure and conserved protein motifs indicated a high conservation of within the same subfamilies; however, variations in protein structure and gene length were observed across different subfamilies. Gene expansion analysis indicated that most gene members within subfamilies originated from duplications of the same genomic segment, and transposable element insertion contributed to the divergence of gene sequences within these subfamilies. Characterization of the miR156 target sequence in SPL transcripts revealed that subfamilies IV to VIII contained these sequences, while subfamilies I to III did not. In both coconut and 14 other plant species, some lost their miR156-binding loci due to gene structure variations. The gene expression profiles revealed significant divergence between miR156-targeted and non-targeted ; the former exhibited low expression levels in the endosperm, while the latter showed comparable expression across all tissues. Notably, demonstrated steadily increasing expression levels in leaves throughout successive leaf primordia and significantly promoted flowering when overexpressed in Arabidopsis. Transient expression assays and 5' RACE confirmed that are targeted by miR156. This study establishes a foundation for investigating the evolutionary characteristics of and provides a theoretical framework for analyzing the functions of key involved in the coconut flowering control pathway.
()是一种关键的转录因子,在调节植物生长发育中发挥着重要作用。挖掘椰子SPL家族为调控重要农艺性状(包括幼年期长度)提供了有价值的见解。在本研究中,鉴定出了25个(相关基因)并将其分为八个亚家族。基因结构和保守蛋白基序分析表明,同一亚家族内(相关基因)具有高度保守性;然而,不同亚家族间观察到了蛋白质结构和基因长度的差异。基因扩张分析表明,亚家族内的大多数基因成员起源于同一基因组片段的复制,转座子插入导致了这些亚家族内基因序列的分化。对SPL转录本中miR156靶序列的特征分析表明,IV至VIII亚家族包含这些序列,而I至III亚家族则没有。在椰子和其他14种植物中,一些(相关基因)由于基因结构变异而失去了miR156结合位点。基因表达谱显示,miR156靶向和非靶向(相关基因)之间存在显著差异;前者在胚乳中表达水平较低,而后者在所有组织中的表达水平相当。值得注意的是,(相关基因)在连续叶原基的叶片中表达水平稳步增加,在拟南芥中过表达时显著促进开花。瞬时表达分析和5' RACE证实(相关基因)是miR156的靶标。本研究为研究(相关基因)的进化特征奠定了基础,并为分析参与椰子开花控制途径的关键(相关基因)的功能提供了理论框架。