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一种用于测定丙酮酸激酶动力学的优化酶联分光光度法。

An Optimized Enzyme-Coupled Spectrophotometric Method for Measuring Pyruvate Kinase Kinetics.

作者信息

Upadhyay Saurabh

机构信息

Kusuma School of Biological Sciences, Indian Institute of Technology, New Delhi, India.

出版信息

Bio Protoc. 2025 Aug 20;15(16):e5415. doi: 10.21769/BioProtoc.5415.

Abstract

Pyruvate kinase M2 (PKM2) is a key glycolytic enzyme that catalyzes the conversion of phosphoenolpyruvate (PEP) to pyruvate, producing ATP in the final step of glycolysis. Unlike other isoforms, PKM2 is uniquely regulated, shifting between active tetramers and less active dimers to balance energy production with biosynthetic demands. This flexibility is exploited in cancer cells to support the Warburg effect and anabolic growth. Additionally, PKM2 can translocate to the nucleus and act as a transcriptional co-activator, influencing gene expression and tumor progression. To facilitate functional studies of PKM2, we present a robust and reproducible protocol for its expression, purification, and enzymatic characterization. PKM2 is expressed in and purified via Ni-NTA affinity and size-exclusion chromatography to ensure high purity and proper folding. Enzymatic activity is measured using a lactate dehydrogenase (LDH)-coupled assay that tracks NADH oxidation at 340 nm, allowing sensitive kinetic analysis under various conditions, including different PEP concentrations, pH levels, and presence of the allosteric activator fructose-1,6-bisphosphate (FBP). This non-radioactive, high-resolution method is suitable for analyzing PKM2 regulation, post-translational modifications, and mutant variants, as well as for screening potential therapeutic modulators, providing a valuable tool for cancer metabolism research. Key features • Enables robust and scalable expression of recombinant wild-type PKM2 in , yielding protein suitable for biochemical and structural studies. • Utilizes a non-radioactive, LDH-coupled spectrophotometric assay to accurately measure PKM2 enzymatic activity in real time by monitoring NADH consumption at 340 nm. • Supports kinetic analysis under physiologically relevant conditions, including variable pH and in the presence or absence of the allosteric activator fructose-1,6-bisphosphate (FBP). • Suitable for comparative activity profiling of PKM2 variants, mutants, or post-translationally modified forms.

摘要

丙酮酸激酶M2(PKM2)是一种关键的糖酵解酶,它催化磷酸烯醇丙酮酸(PEP)转化为丙酮酸,在糖酵解的最后一步产生ATP。与其他同工型不同,PKM2受到独特的调控,在活性四聚体和活性较低的二聚体之间转换,以平衡能量产生与生物合成需求。癌细胞利用这种灵活性来支持瓦伯格效应和合成代谢生长。此外,PKM2可以易位到细胞核并作为转录共激活因子,影响基因表达和肿瘤进展。为了促进对PKM2的功能研究,我们提出了一种用于其表达、纯化和酶学表征的稳健且可重复的方案。PKM2在大肠杆菌中表达,并通过镍-氮三乙酸(Ni-NTA)亲和色谱和尺寸排阻色谱进行纯化,以确保高纯度和正确折叠。使用乳酸脱氢酶(LDH)偶联测定法测量酶活性,该方法在340nm处跟踪NADH氧化,从而在各种条件下进行灵敏的动力学分析,包括不同的PEP浓度、pH水平以及变构激活剂果糖-1,6-二磷酸(FBP)的存在情况。这种非放射性的高分辨率方法适用于分析PKM2的调控、翻译后修饰和突变体变体,以及筛选潜在的治疗性调节剂,为癌症代谢研究提供了一种有价值的工具。关键特性• 能够在大肠杆菌中实现重组野生型PKM2的稳健且可扩展的表达,产生适用于生化和结构研究的蛋白质。• 利用非放射性的LDH偶联分光光度测定法,通过监测340nm处NADH的消耗实时准确测量PKM2的酶活性。• 支持在生理相关条件下进行动力学分析,包括可变pH以及变构激活剂果糖-1,6-二磷酸(FBP)存在或不存在的情况。• 适用于PKM2变体、突变体或翻译后修饰形式的比较活性分析。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef48/12378421/0ba16de3f4a2/BioProtoc-15-16-5415-g001.jpg

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