Lawson-Michod Katherine A, Johnson Courtney E, Barnard Mollie E, Davidson Natalie R, Collin Lindsay J, Nix David A, Huff Chad D, Berchuck Andrew, Salas Lucas A, Greene Casey S, Marks Jeffrey R, Peres Lauren C, Doherty Jennifer A, Schildkraut Joellen M
Fred Hutchinson Cancer Center, Seattle, WA, United States.
Emory University, Atlanta, GA, United States.
Cancer Epidemiol Biomarkers Prev. 2025 Sep 4. doi: 10.1158/1055-9965.EPI-25-0762.
Half of ovarian high-grade serous carcinomas (HGSC) have homologous recombination deficiency (HRD). However, HRD is not well-characterized in Black individuals who experience worse survival after a diagnosis of HGSC. The objective of this study was to characterize ovarian HGSC HRD and examine its association with survival by self-reported race.
HRD features were identified using matched tumor-normal whole-exome and RNA sequencing in a HGSC cohort. We calculated age and stage-adjusted hazard ratios (HR) and 95% confidence intervals (CIs) for survival, comparing individuals with a feature to those without, separately by self-reported race.
Any HRD was associated with a 32% reduced risk of death in Black individuals compared with a 62% reduction in White individuals (Black HR=0.68, 95%CI 0.43-1.09; White HR=0.38, 95%CI 0.14-1.04). More of the germline and somatic variants detected among Black individuals were unannotated or variants of uncertain significance (VUS; germline 65% versus 45%; somatic 62% versus 50%, respectively). Black individuals with germline unannotated/VUS were more likely to have tumors with HRD scarring and a first-degree family history of breast or ovarian cancer compared with those without (HRD scar 71.4% versus 49.6%; family history 68.4% versus 34.6%).
HRD testing informs precision-based medicine approaches that improve outcomes, but a higher proportion of VUS among Black individuals may complicate referral for such care leading to worse outcomes for Black individuals.
Our findings emphasize the importance of recruiting diverse individuals in genomics research and better characterizing VUS.
一半的卵巢高级别浆液性癌(HGSC)存在同源重组缺陷(HRD)。然而,在诊断为HGSC后生存率较差的黑人个体中,HRD的特征尚未得到充分描述。本研究的目的是描述卵巢HGSC的HRD特征,并通过自我报告的种族来检查其与生存率的关联。
在一个HGSC队列中,使用匹配的肿瘤-正常全外显子组和RNA测序来识别HRD特征。我们计算了年龄和分期调整后的生存风险比(HR)和95%置信区间(CI),分别按自我报告的种族比较有该特征的个体和无该特征的个体。
与白人个体死亡风险降低62%相比,任何HRD与黑人个体死亡风险降低32%相关(黑人HR = 0.68,95%CI 0.43 - 1.09;白人HR = 0.38,95%CI 0.14 - 1.04)。在黑人个体中检测到的种系和体细胞变异中,更多是未注释的或意义不明确的变异(VUS;种系分别为65%对45%;体细胞分别为62%对50%)。与没有种系未注释/VUS的黑人个体相比,有此类情况的黑人个体更有可能出现具有HRD瘢痕的肿瘤以及乳腺癌或卵巢癌的一级家族史(HRD瘢痕分别为71.4%对49.6%;家族史分别为68.4%对34.6%)。
HRD检测为基于精准医学的方法提供信息,可改善治疗结果,但黑人个体中较高比例的VUS可能使此类治疗的转诊复杂化,导致黑人个体的治疗结果更差。
我们的研究结果强调了在基因组学研究中招募不同个体以及更好地描述VUS的重要性。