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从加利福尼亚葡萄藤中分离出的里法伊复合体(菌株DL1 - 3、KC1 - 1和PAR10)中生物防治菌株的完整线粒体基因组。

Complete mitochondrial genomes of biological control stains in the Rifai complex (strains DL1-3, KC1-1, and PAR10) isolated from Californian grapevines.

作者信息

Wallis Christopher M, Chen Jianchi

机构信息

Crop Diseases, Pests and Genetics Research Unit, U.S. Department of Agriculture-Agricultural Research Service, San Joaquin Valley Agricultural Sciences Center, Parlier, CA, USA.

出版信息

Mitochondrial DNA B Resour. 2025 Sep 2;10(10):893-898. doi: 10.1080/23802359.2025.2552822. eCollection 2025.

Abstract

The complete mitochondrial genomes of sp. strains DL1-3 (29,197 bp), KC1-1 (27,631 bp), and PAR10 (29,122 bp), isolated from grapevine leaves, were obtained. All strains contained 25 or 26 tRNA genes, two rRNA genes, and 15 core mitochondrial protein coding genes. Phylogenetic trees made with housekeeping region and mitochondrial sequences placed these strains in the clade, with DL1-3 and PAR10 as potential novel species, and KC1-1 identified as a strain of . This suggests that complete mitochondria genome comparisons provide valuable information in resolving questions of species identification, including putatively identifying those that are novel.

摘要

从葡萄叶片中分离得到了sp. 菌株DL1-3(29,197 bp)、KC1-1(27,631 bp)和PAR10(29,122 bp)的完整线粒体基因组。所有菌株都含有25或26个tRNA基因、两个rRNA基因以及15个核心线粒体蛋白质编码基因。利用看家区域和线粒体序列构建的系统发育树将这些菌株置于进化枝中,其中DL1-3和PAR10为潜在的新物种,KC1-1被鉴定为的一个菌株。这表明完整线粒体基因组比较在解决物种鉴定问题方面提供了有价值的信息,包括推测鉴定出新的物种。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f7a7/12406320/ca6bdadc2a97/TMDN_A_2552822_F0001_C.jpg

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