Enlund Sabina, Lim Chae-Eun, Hoang Isabella, Joshi Sonali, Amor Amanda Ramilo, Thomsson Cecilia, Sinha Indranil, Fard Shahrzad Shirazi, Nilsson Anna, Hermanson Ola, Jiang Qingfei, Holm Frida
Deparment of Women's and Children's Health, Division of Pediatric Oncology and Surgery, Karolinska Institutet, 171 77 Stockholm, Sweden.
Division of Regenerative Medicine, Department of Medicine, Moores Cancer Center, University of California, San Diego, La Jolla, CA, USA, Moores Cancer Center, La Jolla, CA 92037, USA.
bioRxiv. 2025 Aug 30:2025.08.29.673071. doi: 10.1101/2025.08.29.673071.
Post-transcriptional RNA modifications, such as N6-methyladenosine (m6A) methylation and adenosine to inosine (A-to-I) editing, are critical regulators of hematopoietic stem cell (HSC) self-renewal and differentiation, yet their precise contributions to malignant transformation are not fully elucidated. In this study, we uncovered the epitranscriptomic landscape caused by knockdown of genes from the methyltransferase (METTL)-family in hematopoietic stem and progenitor cells (HSPCs). We identified both converging and distinct roles of METTL3 and METTL14, known members of the m6A writer complex, as well as orphan gene METTL13. Notably, METTL13 was uniquely upregulated by adenosine deaminase acting on RNA 1 (ADAR1) overexpression, while other METTL genes were downregulated. Knockdown of METTL13 altered the expression of multiple genes involved in oncogenic development in HSPCs. Furthermore, METTL13 was associated with a high-risk profile in pediatric T-cell acute lymphoblastic leukemia (T-ALL), and functional studies confirmed that METTL13 is required for T-ALL cell proliferation and survival both and . Collectively, our results indicate a previously unrecognized, oncogenic role for METTL13 in pre-leukemic transformation and T-ALL pathogenesis.
转录后RNA修饰,如N6-甲基腺苷(m6A)甲基化和腺苷到肌苷(A-to-I)编辑,是造血干细胞(HSC)自我更新和分化的关键调节因子,但其对恶性转化的确切作用尚未完全阐明。在本研究中,我们揭示了造血干细胞和祖细胞(HSPCs)中甲基转移酶(METTL)家族基因敲低所导致的表观转录组图谱。我们确定了m6A书写复合体的已知成员METTL3和METTL14以及孤儿基因METTL13的趋同和不同作用。值得注意的是,METTL13在RNA特异性腺苷脱氨酶1(ADAR1)过表达时被独特地上调,而其他METTL基因则被下调。METTL13的敲低改变了HSPCs中多个参与致癌发展的基因的表达。此外,METTL13与儿童T细胞急性淋巴细胞白血病(T-ALL)的高风险特征相关,功能研究证实METTL13是T-ALL细胞增殖和存活所必需的。总之,我们的结果表明METTL13在白血病前期转化和T-ALL发病机制中具有先前未被认识到的致癌作用。