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CEBPB作为一种预后生物标志物及其与透明细胞肾细胞癌中免疫细胞的关联。

CEBPB as a prognostic biomarker and its association with immune cells in clear cell renal cell carcinoma.

作者信息

Ren Yaoqiang, Wei Min, Tian Quanfa, Guo Wenke

机构信息

Department of Urology Surgery, Fenyang Hospital of Shanxi Province, Lüliang, Shanxi, China.

Department of Thyroid Surgery, Fenyang Hospital of Shanxi Province, Lüliang, Shanxi, China.

出版信息

Biochem Biophys Rep. 2025 Sep 1;44:102231. doi: 10.1016/j.bbrep.2025.102231. eCollection 2025 Dec.

Abstract

Clear cell renal cell carcinoma (ccRCC) is a highly aggressive malignancy with a poor prognosis. This study examines the expression, prognostic significance, and immune association of CCAAT/enhancer-binding protein beta (CEBPB) in ccRCC. RNA sequencing data from The Cancer Genome Atlas (TCGA) and Genotype-Tissue Expression (GTEx) Project were analyzed using the STAR workflow and R software. Immunohistochemistry (IHC) validated CEBPB expression in ccRCC tissues. Functional enrichment analyses (Gene Ontology and Kyoto Encyclopedia of Genes and Genomes) and a protein-protein interaction (PPI) network (STRING and Cytoscape) were used to explore CEBPB-related pathways. Single-sample gene set enrichment analysis (ssGSEA) revealed significant correlations between CEBPB expression and the infiltration of 24 immune cell types. CEBPB was linked to immune-related pathways, including humoral immune response, leukocyte migration, and cytokine signaling. PPI analysis identified strong interactions with STAT3/EP300, highlighting its role in immune regulation. Cox regression analysis showed that high CEBPB expression is associated with poorer overall survival, supporting its potential as a prognostic biomarker. In conclusion, CEBPB plays a key role in shaping the immune microenvironment of ccRCC and may serve as a novel prognostic marker and therapeutic target.

摘要

透明细胞肾细胞癌(ccRCC)是一种侵袭性很强且预后较差的恶性肿瘤。本研究检测CCAAT/增强子结合蛋白β(CEBPB)在ccRCC中的表达、预后意义及免疫相关性。使用STAR工作流程和R软件分析了来自癌症基因组图谱(TCGA)和基因型-组织表达(GTEx)项目的RNA测序数据。免疫组织化学(IHC)验证了CEBPB在ccRCC组织中的表达。功能富集分析(基因本体论和京都基因与基因组百科全书)和蛋白质-蛋白质相互作用(PPI)网络(STRING和Cytoscape)用于探索与CEBPB相关的途径。单样本基因集富集分析(ssGSEA)揭示了CEBPB表达与24种免疫细胞类型浸润之间的显著相关性。CEBPB与免疫相关途径有关,包括体液免疫反应白细胞迁移和细胞因子信号传导。PPI分析确定了与STAT3/EP300的强相互作用,突出了其在免疫调节中的作用。Cox回归分析表明,CEBPB高表达与较差的总生存期相关,支持其作为预后生物标志物的潜力。总之,CEBPB在塑造ccRCC免疫微环境中起关键作用,可能作为一种新的预后标志物和治疗靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9fc8/12423705/2b46239b251e/gr1.jpg

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