Rakhit G, Chignell C F
Biochim Biophys Acta. 1979 Sep 29;580(1):108-19. doi: 10.1016/0005-2795(79)90202-2.
The topography of the active sites of native horseradish peroxidase and manganic horseradish peroxidase has been studied with the aid of a spin-labeled analog of benzhydroxamic acid (N-(1-oxyl-2,2,5,5-tetramethylpyrroline-3-carboxy)-p-aminobenzhydroxamic acid). The optical spectra of complexes between the spin-labeled analog of benzhydroxamic acid and Fe3+ or Mn3+ horseradish peroxidase resembled the spectra of the corresponding enzyme complexes with benzhydroxamic acid. Electron spin resonance (ESR) measurement indicated that at pH 7 the nitroxide moiety of the spin-labeled analog of benzhydroxamic acid became strongly immobilized when this label bound to either ferric or manganic horseradish peroxidase. The titration of horseradish peroxidase with the spin-labeled analog of benzhydroxamic acid revealed a single binding site with association constant Ka approximately 4.7 . 10(5) M-1. Since the interaction of ligands (e.g. F-, CN-) and H2O2 with horseradish peroxidase was found to displace the spin label, it was concluded that the spin label did not indeed bind to the active site of horseradish peroxidase. At alkaline pH values, the high spin iron of native horseradish peroxidase is converted to the low spin form and the binding of the spin-labeled analog of benzhydroxamic acid to horseradish peroxidase is completely inhibited. From the changes in the concentration of both bound and free spin label with pH, the pK value of the acid-alkali transition of horseradish peroxidase was found to be 10.5. The 2Tm value of the bound spin label varied inversely with temperature, reaching a value of 68.25 G at 0 degree C and 46.5 G at 52 degrees C. The dipolar interaction between the iron atom and the free radical accounted for a 12% decrease in the ESR signal intensity of the spin label bound to horseradish peroxidase. From this finding, the minimum distance between the iron atom and nitroxide group and hence a lower limit to the depth of the heme pocket of horseradish peroxidase was estimated to be 22 A.
借助苯甲羟肟酸的自旋标记类似物(N-(1-氧基-2,2,5,5-四甲基吡咯啉-3-羧基)-对氨基苯甲羟肟酸),对天然辣根过氧化物酶和锰辣根过氧化物酶活性位点的拓扑结构进行了研究。苯甲羟肟酸的自旋标记类似物与Fe3+或Mn3+辣根过氧化物酶之间形成的复合物的光谱,类似于相应的酶与苯甲羟肟酸形成的复合物的光谱。电子自旋共振(ESR)测量表明,在pH 7时,当该标记物与铁或锰辣根过氧化物酶结合时,苯甲羟肟酸的自旋标记类似物的氮氧化物部分会强烈固定。用苯甲羟肟酸的自旋标记类似物对辣根过氧化物酶进行滴定,结果显示有一个单一的结合位点,其缔合常数Ka约为4.7×10(5) M-1。由于发现配体(如F-、CN-)和H2O2与辣根过氧化物酶的相互作用会取代自旋标记物,因此得出结论,自旋标记物实际上并未与辣根过氧化物酶的活性位点结合。在碱性pH值下,天然辣根过氧化物酶的高自旋铁会转变为低自旋形式,并且苯甲羟肟酸的自旋标记类似物与辣根过氧化物酶的结合会被完全抑制。根据结合态和游离态自旋标记物的浓度随pH值的变化,发现辣根过氧化物酶酸碱转变的pK值为10.5。结合态自旋标记物的2Tm值随温度呈反比变化,在0℃时达到68.25 G,在52℃时为46.5 G。铁原子与自由基之间的偶极相互作用导致与辣根过氧化物酶结合的自旋标记物的ESR信号强度降低了12%。根据这一发现,估计铁原子与氮氧化物基团之间的最小距离,从而得出辣根过氧化物酶血红素口袋深度的下限为22 Å。