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酶结合的5-脱氮黄素与过氧化物的反应。通过环氧化物中间体进行嘧啶环收缩。

Reaction of enzyme-bound 5-deazaflavin with peroxides. Pyrimidine ring contraction via an epoxide intermediate.

作者信息

Jorns M S, Ballenger C, Kinney G, Pokora A, Vargo D

出版信息

J Biol Chem. 1983 Jul 25;258(14):8561-7.

PMID:6134730
Abstract

Reaction of peroxides with 5-deazaflavin bound to glucose oxidase, lactate oxidase, or D-amino acid oxidase results in the formation of 5-deazaflavin 4a, 5-epoxide. The reaction of D-amino acid oxidase with m-chloroperoxybenzoate is an exception since the reagent reacts rapidly with the protein moiety to form m-chlorobenzoate which then binds noncovalently near the unmodified coenzyme. Epoxide bound to glucose oxidase is converted to deazaFAD X X in a reaction similar to that observed previously with oxynitrilase and glycolate oxidase. With lactate oxidase the epoxide is quite stable in the absence of light. With D-amino acid oxidase, denaturation of the protein is accompanied by the release of the epoxide into solution where it decomposes in a manner similar to that observed with model epoxide compounds at neutral pH. Reaction of deazaFAD X X with phosphodiesterase and alkaline phosphatase yields deazariboflavin X X. The same compound has been formed in model studies by exposing 5-deazariboflavin 4a,5-epoxide to alkaline conditions. Structural studies indicate that this reaction involves contraction of the pyrimidine ring to yield 4-ribityl-6,7-dimethyloxazolo[ 4,5-b ]quinolin-2(4H)-one. Model reaction studies are consistent with a mechanism initiated by alkaline hydrolysis of the pyrimidine ring at position 4 followed by two additional steps which proceed at neutral pH. A similar mechanism for the enzyme reactions appears likely since analogous intermediates are detected in the glycolate oxidase and the model reactions. The results suggest that position 4 of the coenzyme in oxynitrilase, glycolate oxidase, and glucose oxidase must be accessible to solvent and that the protein moiety must facilitate the initial hydrolysis of the pyrimidine ring since the enzyme reactions occur at neutral pH. Failure to observe formation of deazaFMN X X with lactate oxidase is attributed, at least in part, to the inaccessibility of the pyrimidine ring to solvent.

摘要

过氧化物与结合在葡萄糖氧化酶、乳酸氧化酶或D - 氨基酸氧化酶上的5 - 脱氮黄素反应会生成5 - 脱氮黄素4a,5 - 环氧化物。D - 氨基酸氧化酶与间氯过氧苯甲酸的反应是个例外,因为该试剂会迅速与蛋白质部分反应生成间氯苯甲酸,然后间氯苯甲酸在未修饰的辅酶附近非共价结合。与葡萄糖氧化酶结合的环氧化物在一个类似于之前在氧腈酶和乙醇酸氧化酶中观察到的反应中转化为脱氮黄素XX。对于乳酸氧化酶,在没有光照的情况下环氧化物相当稳定。对于D - 氨基酸氧化酶,蛋白质变性伴随着环氧化物释放到溶液中,在溶液中它以类似于在中性pH下模型环氧化物化合物所观察到的方式分解。脱氮黄素XX与磷酸二酯酶和碱性磷酸酶反应生成脱氮核黄素XX。在模型研究中,通过将5 - 脱氮核黄素4a,5 - 环氧化物暴露于碱性条件下也形成了相同的化合物。结构研究表明,该反应涉及嘧啶环的收缩,生成4 - 核糖基 - 6,7 - 二甲基恶唑并[4,5 - b]喹啉 - 2(4H) - 酮。模型反应研究与由嘧啶环在4位的碱性水解引发、随后在中性pH下进行的另外两个步骤的机制一致。由于在乙醇酸氧化酶和模型反应中检测到类似的中间体,酶反应的类似机制似乎是可能的。结果表明,氧腈酶、乙醇酸氧化酶和葡萄糖氧化酶中辅酶的4位必须可被溶剂接触,并且蛋白质部分必须促进嘧啶环的初始水解,因为酶反应在中性pH下发生。未能观察到乳酸氧化酶形成脱氮黄素单核苷酸XX至少部分归因于嘧啶环无法被溶剂接触。

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