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真核生物延伸因子Tu与核酸的结合。

Binding of eucaryotic elongation factor Tu to nucleic acids.

作者信息

Slobin L I

出版信息

J Biol Chem. 1983 Apr 25;258(8):4895-900.

PMID:6187743
Abstract

The binding of eucaryotic elongation factor Tu (eEF-Tu) to nucleic acids was investigated. eEF-Tu binds to a variety of different nucleic acids with high affinity, showing a strong preference for 18 S and 28 S rRNA over transfer RNA and for ribose-containing polymers over polydeoxyribonucleotides. The factor binds at multiple sites on 28 S rRNA without strong cooperativity. eEF-Tu binds strongly to poly(G) and poly(U) but weakly, if at all, to poly(A) and poly(C). Experiments employing an airfuge demonstrate that eEF-Tu can form a quaternary complex containing the factor, 28 S rRNA, aminoacyl-tRNA, and GTP. The existence of two distinct RNA binding sites on eEF-Tu suggests that rRNA may play a role in the recognition of eEF-Tu.aminoacyl-tRNA.GTP complexes by polysomes. Support for this suggestion comes from experiments which show that poly(G) inhibits the factor-dependent binding of aminoacyl-tRNA to mRNA-programmed 80 S ribosomes. In addition, it is shown that eEF-Tu possesses an intrinsic GTPase activity which is stimulated significantly by 28 S rRNA, poly(G), and poly(U). The binding of eEF-Tu to poly(G) lowers the activation energy for eEF-Tu GTPase from 74.3 to 65.9 kJ . mol-1 and approximately doubles the Vmax of the enzymatic reaction. The results are discussed in relation to the binding of eEF-Tu to ribosomes during protein synthesis.

摘要

对真核生物延伸因子Tu(eEF-Tu)与核酸的结合进行了研究。eEF-Tu以高亲和力结合多种不同的核酸,相较于转运RNA,它对18 S和28 S核糖体RNA表现出强烈偏好,对含核糖的聚合物的偏好高于多脱氧核糖核苷酸。该因子在28 S核糖体RNA的多个位点结合,且无强协同性。eEF-Tu与聚鸟苷酸(poly(G))和聚尿苷酸(poly(U))强烈结合,但与聚腺苷酸(poly(A))和聚胞苷酸(poly(C))结合较弱(若有结合的话)。采用空气离心机的实验表明,eEF-Tu可形成一种包含该因子、28 S核糖体RNA、氨酰-tRNA和鸟苷三磷酸(GTP)的四元复合物。eEF-Tu上存在两个不同的RNA结合位点,这表明核糖体RNA可能在多核糖体识别eEF-Tu·氨酰-tRNA·GTP复合物中发挥作用。这一推测得到了实验支持,实验表明聚鸟苷酸抑制氨酰-tRNA与mRNA编程的80 S核糖体的因子依赖性结合。此外,研究表明eEF-Tu具有内在的GTP酶活性,28 S核糖体RNA、聚鸟苷酸和聚尿苷酸可显著刺激该活性。eEF-Tu与聚鸟苷酸的结合将eEF-Tu GTP酶的活化能从74.3 kJ·mol-1降至65.9 kJ·mol-1,并使酶促反应的最大反应速度(Vmax)增加约一倍。结合蛋白质合成过程中eEF-Tu与核糖体的结合对这些结果进行了讨论。

相似文献

1
Binding of eucaryotic elongation factor Tu to nucleic acids.真核生物延伸因子Tu与核酸的结合。
J Biol Chem. 1983 Apr 25;258(8):4895-900.
2
Substitution of Val20 by Gly in elongation factor Tu. Effects on the interaction with elongation factors Ts, aminoacyl-tRNA and ribosomes.延伸因子Tu中缬氨酸20被甘氨酸取代。对其与延伸因子Ts、氨酰tRNA及核糖体相互作用的影响。
Eur J Biochem. 1989 Nov 6;185(2):341-6. doi: 10.1111/j.1432-1033.1989.tb15121.x.
3
The isolation and characterization of elongation factor eEF-Ts from Krebs-II mouse-ascites-tumor cells and its role in the elongation process.从克雷布斯-II型小鼠腹水肿瘤细胞中分离和鉴定延伸因子eEF-Ts及其在延伸过程中的作用。
Eur J Biochem. 1978 Dec;92(2):479-90. doi: 10.1111/j.1432-1033.1978.tb12770.x.
4
The complex formation between Escherichia coli aminoacyl-tRNA, elongation factor Tu and GTP. The effect of the side-chain of the amino acid linked to tRNA.大肠杆菌氨酰-tRNA、延伸因子Tu与GTP之间的复合物形成。与tRNA相连的氨基酸侧链的作用。
Eur J Biochem. 1980;108(1):213-21. doi: 10.1111/j.1432-1033.1980.tb04714.x.
5
Effects of mutagenesis of Gln97 in the switch II region of Escherichia coli elongation factor Tu on its interaction with guanine nucleotides, elongation factor Ts, and aminoacyl-tRNA.大肠杆菌延伸因子Tu的开关II区域中谷氨酰胺97突变对其与鸟嘌呤核苷酸、延伸因子Ts及氨酰-tRNA相互作用的影响。
Biochemistry. 2003 Nov 25;42(46):13587-95. doi: 10.1021/bi034855a.
6
The reaction of ribosomes with elongation factor Tu.GTP complexes. Aminoacyl-tRNA-independent reactions in the elongation cycle determine the accuracy of protein synthesis.核糖体与延伸因子Tu.GTP复合物的反应。延伸循环中不依赖氨酰tRNA的反应决定了蛋白质合成的准确性。
J Biol Chem. 1986 Apr 15;261(11):4868-74.
7
The elongation factor Tu from Escherichia coli, aminoacyl-tRNA, and guanosine tetraphosphate form a ternary complex which is bound by programmed ribosomes.来自大肠杆菌的延伸因子Tu、氨酰-tRNA和四磷酸鸟苷形成一种三元复合物,该复合物会与程序化核糖体结合。
J Biol Chem. 1983 Dec 10;258(23):14200-5.
8
Interaction of aminoacyl-tRNA with bacterial elongation factor Tu: GTP complex: effects of the amino group of amino acid esterified to tRNA, the amino acid side chain, and tRNA structure.氨酰-tRNA与细菌延伸因子Tu:GTP复合物的相互作用:酯化于tRNA的氨基酸的氨基、氨基酸侧链及tRNA结构的影响。
J Biochem. 1982 Jan;91(1):291-9. doi: 10.1093/oxfordjournals.jbchem.a133687.
9
Pulvomycin, an inhibitor of protein biosynthesis preventing ternary complex formation between elongation factor Tu, GTP, and aminoacyl-tRNA.普尔沃霉素,一种蛋白质生物合成抑制剂,可阻止延伸因子Tu、GTP和氨酰tRNA之间形成三元复合物。
Proc Natl Acad Sci U S A. 1978 Nov;75(11):5324-8. doi: 10.1073/pnas.75.11.5324.
10
Complete kinetic mechanism of elongation factor Tu-dependent binding of aminoacyl-tRNA to the A site of the E. coli ribosome.延伸因子Tu依赖的氨酰tRNA与大肠杆菌核糖体A位点结合的完整动力学机制。
EMBO J. 1998 Dec 15;17(24):7490-7. doi: 10.1093/emboj/17.24.7490.

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J Virol. 2002 Jun;76(11):5678-91. doi: 10.1128/jvi.76.11.5678-5691.2002.
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Proc Natl Acad Sci U S A. 1984 Apr;81(8):2337-41. doi: 10.1073/pnas.81.8.2337.
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