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盘基网柄菌转座元件DIRS-1具有350个碱基对的反向末端重复序列,其中包含一个热休克启动子。

Dictyostelium transposable element DIRS-1 has 350-base-pair inverted terminal repeats that contain a heat shock promoter.

作者信息

Zuker C, Cappello J, Lodish H F, George P, Chung S

出版信息

Proc Natl Acad Sci U S A. 1984 May;81(9):2660-4. doi: 10.1073/pnas.81.9.2660.

Abstract

DIRS-1 is a 4.7-kilobase-pair repetitive and apparently transposable Dictyostelium genetic element that is transcribed during differentiation or after heat shock. The terminal regions of DIRS-1 are inverted repeats of 330 base pairs. The repeats are highly conserved both within a given element as well as between different members of the family (less than 10% divergence). At the distal end of all left repeats is a 32-nucleotide sequence composed almost entirely of A and T residues. In addition to this 32-base A + T sequence, the distal region of all right repeats is extended by a 28-base-pair A + T-rich sequence that is identical in all copies. The sequences flanking each DIRS-1 sequence are completely dissimilar, and there appears to be no duplication of the genomic DNA sequence at the presumed point of DIRS-1 insertion. The terminal repeats can also be found interspersed in the genome independently of the complete element. In addition, the terminal repeats carry a 15-nucleotide sequence that greatly resembles the Drosophila consensus heat shock promoter and may be involved in the transcriptional induction of the DIRS-1 sequences.

摘要

DIRS-1是一种4.7千碱基对的重复性且明显可转座的盘基网柄菌遗传元件,在分化过程中或热休克后转录。DIRS-1的末端区域是330个碱基对的反向重复序列。这些重复序列在给定元件内以及家族不同成员之间高度保守(差异小于10%)。在所有左侧重复序列的远端是一个几乎完全由A和T残基组成的32个核苷酸的序列。除了这个32碱基的A + T序列外,所有右侧重复序列的远端区域由一个在所有拷贝中都相同的28碱基对富含A + T的序列延伸。每个DIRS-1序列两侧的序列完全不同,并且在DIRS-1插入的假定位点似乎没有基因组DNA序列的重复。末端重复序列也可以独立于完整元件散布在基因组中。此外,末端重复序列携带一个15个核苷酸的序列,与果蝇共有热休克启动子非常相似,可能参与DIRS-1序列的转录诱导。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b450/345129/fcdbceff5c85/pnas00610-0068-a.jpg

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