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通过pH研究确定的二氢叶酸还原酶反应的催化机制。

Catalytic mechanism of the dihydrofolate reductase reaction as determined by pH studies.

作者信息

Stone S R, Morrison J F

出版信息

Biochemistry. 1984 Jun 5;23(12):2753-8. doi: 10.1021/bi00307a034.

Abstract

The variation with pH of the kinetic parameters of the reaction catalyzed by dihydrofolate reductase from Escherichia coli has been determined with the aim of elucidating the chemical mechanism of the reaction. The (V/K)DHF and V profiles indicated that protonation enhances the observed rate of interaction of dihydrofolate (DHF) with the enzyme-NADPH complex as well as the maximum velocity of the reaction. The pKa value of 8.09 observed in the (V/K)DHF profile is similar to that of 7.9 observed in the Ki profile for 2,4-diamino-6,7-dimethylpteridine while the pKa value of the V profile is displaced to 8.4. From the magnitude of the pH-independent value for (V/K)DHF, it is concluded that unprotonated dihydrofolate must react, at neutral pH, with the protonated form of the enzyme. The D(V/K)DHF value is independent of pH and equal to unity whereas the DV value varies as a wave function of pH with limiting values of 1.5 and 1.0 at low and high pH, respectively. It is proposed that dihydrofolate reacts with the unprotonated enzyme-NADPH complex to form a dead-end complex and with the protonated form of the same complex to form a productive complex. Further, it is considered that the protonated carboxyl of Asp-27 at the active site of the enzyme is responsible for the protonation of the N-5 nitrogen of dihydrofolate and that this protonation precedes and facilitates hydride transfer.

摘要

为阐明反应的化学机制,已测定了大肠杆菌二氢叶酸还原酶催化反应动力学参数随pH的变化情况。(V/K)DHF和V曲线表明,质子化提高了观察到的二氢叶酸(DHF)与酶-NADPH复合物相互作用的速率以及反应的最大速度。在(V/K)DHF曲线中观察到的8.09的pKa值与2,4-二氨基-6,7-二甲基蝶啶的Ki曲线中观察到的7.9的pKa值相似,而V曲线的pKa值移至8.4。从(V/K)DHF的pH无关值的大小可以得出结论,在中性pH下,未质子化的二氢叶酸必须与质子化形式的酶发生反应。D(V/K)DHF值与pH无关且等于1,而DV值随pH呈波函数变化,在低pH和高pH下的极限值分别为1.5和1.0。有人提出,二氢叶酸与未质子化的酶-NADPH复合物反应形成一个终止复合物,与同一复合物的质子化形式反应形成一个活性复合物。此外,有人认为,酶活性位点处Asp-27的质子化羧基负责二氢叶酸N-5氮的质子化,且这种质子化先于并促进氢化物转移。

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