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核糖体DNA间隔区启动子转录活性的变化

Variations in transcriptional activity of rDNA spacer promoters.

作者信息

Morgan G T, Roan J G, Bakken A H, Reeder R H

出版信息

Nucleic Acids Res. 1984 Aug 10;12(15):6043-52. doi: 10.1093/nar/12.15.6043.

DOI:10.1093/nar/12.15.6043
PMID:6473101
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC320055/
Abstract

We have compared the DNA sequences of several different examples of the duplicated polymerase I promoters that are found in rDNA spacers of Xenopus laevis. Although different spacers exhibit different amounts of transcription in vivo, this does not seem to be due to DNA sequence differences between spacer promoters. We have found that several different spacer promoters when subcloned and injected into oocytes exhibit similar promoter activities when transcription is assayed by primer extension analysis. Moreover, the activity of these spacer promoters is the same as that of a co-injected gene promoter. The equivalence of spacer promoter activity and gene promoter activity was also found when rDNA plasmids containing intact spacers were injected into oocytes and transcription assayed by primer extension. This is in contrast to (1) the inactivity normally exhibited by the promoters of endogenous spacers in oocytes, (2) the relative inactivity of spacer promoters found when transcription of the same rDNA plasmids is assayed by electron microscopy.

摘要

我们比较了在非洲爪蟾核糖体DNA间隔区中发现的几个不同的重复聚合酶I启动子的DNA序列。尽管不同的间隔区在体内表现出不同程度的转录,但这似乎并非由于间隔区启动子之间的DNA序列差异所致。我们发现,当通过引物延伸分析检测转录时,几个不同的间隔区启动子亚克隆并注射到卵母细胞中时表现出相似的启动子活性。此外,这些间隔区启动子的活性与共注射的基因启动子的活性相同。当将含有完整间隔区的核糖体DNA质粒注射到卵母细胞中并通过引物延伸分析检测转录时,也发现了间隔区启动子活性和基因启动子活性的等效性。这与以下情况形成对比:(1)卵母细胞中内源性间隔区启动子通常表现出的无活性;(2)当通过电子显微镜检测相同核糖体DNA质粒的转录时发现的间隔区启动子的相对无活性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c005/320055/51d810851e15/nar00333-0102-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c005/320055/47b34476dab8/nar00333-0100-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c005/320055/9aac832d7783/nar00333-0101-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c005/320055/51d810851e15/nar00333-0102-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c005/320055/47b34476dab8/nar00333-0100-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c005/320055/9aac832d7783/nar00333-0101-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c005/320055/51d810851e15/nar00333-0102-a.jpg

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1
Variations in transcriptional activity of rDNA spacer promoters.核糖体DNA间隔区启动子转录活性的变化
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Spacer promoters are essential for efficient enhancement of X. laevis ribosomal transcription.间隔启动子对于高效增强非洲爪蟾核糖体转录至关重要。
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Transcription of cloned Xenopus laevis ribosomal DNA microinjected into Xenopus oocytes, and the identification of an RNA polymerase I promoter.将克隆的非洲爪蟾核糖体DNA显微注射到非洲爪蟾卵母细胞中的转录,以及一种RNA聚合酶I启动子的鉴定。
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Transcription in oocytes of highly methylated rDNA from Xenopus laevis sperm.非洲爪蟾精子中高度甲基化的核糖体DNA在卵母细胞中的转录。
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Enhancer-like properties of the 60/81 bp elements in the ribosomal gene spacer of Xenopus laevis.非洲爪蟾核糖体基因间隔区60/81碱基对元件的类增强子特性
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Functional analysis of Arabidopsis thaliana rRNA gene and spacer promoters in vivo and by transient expression.拟南芥rRNA基因和间隔区启动子在体内及瞬时表达中的功能分析
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引用本文的文献

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Nucleic Acids Res. 2000 Mar 15;28(6):1283-98. doi: 10.1093/nar/28.6.1283.
2
Analysis of nucleolar transcription and processing domains and pre-rRNA movements by in situ hybridization.通过原位杂交分析核仁转录和加工结构域以及前体核糖体RNA的移动
Chromosoma. 1997 Jun;105(7-8):481-95. doi: 10.1007/BF02510485.
3
The repeat organizer, a specialized insulator element within the intergenic spacer of the Xenopus rRNA genes.重复序列组织者,一种位于非洲爪蟾rRNA基因基因间隔区内的特殊绝缘子元件。

本文引用的文献

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Transcription of cloned Xenopus laevis ribosomal DNA microinjected into Xenopus oocytes, and the identification of an RNA polymerase I promoter.将克隆的非洲爪蟾核糖体DNA显微注射到非洲爪蟾卵母细胞中的转录,以及一种RNA聚合酶I启动子的鉴定。
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Effect of intercalating agents on RNA polymerase I promoter selection in Xenopus laevis.嵌入剂对非洲爪蟾RNA聚合酶I启动子选择的影响。
Mol Cell Biol. 1984 Dec;4(12):2851-7. doi: 10.1128/mcb.4.12.2851-2857.1984.
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Nature. 1983;302(5905):223-8. doi: 10.1038/302223a0.
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Enhancer-like properties of the 60/81 bp elements in the ribosomal gene spacer of Xenopus laevis.非洲爪蟾核糖体基因间隔区60/81碱基对元件的类增强子特性
Cell. 1984 May;37(1):285-9. doi: 10.1016/0092-8674(84)90324-6.
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Nested control regions promote Xenopus ribosomal RNA synthesis by RNA polymerase I.嵌套控制区域通过RNA聚合酶I促进非洲爪蟾核糖体RNA的合成。
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Transcription in cloned spacers of Xenopus laevis ribosomal DNA.非洲爪蟾核糖体DNA克隆间隔区的转录
Proc Natl Acad Sci U S A. 1983 Nov;80(21):6490-4. doi: 10.1073/pnas.80.21.6490.
10
Nucleotide sequence of the initiation site for ribosomal RNA transcription in Drosophila melanogaster: comparison of genes with and without insertions.黑腹果蝇核糖体RNA转录起始位点的核苷酸序列:有插入和无插入基因的比较。
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