Paponov V D, Fabrichnaia O B, Kuznetsov I A
Mol Biol (Mosk). 1984 Nov-Dec;18(6):1538-48.
Rheological properties of the water solutions of H+- and Na+-DNA were studied at shear rates in the range of 0.12-126 sec-1. It was found that the concentration dependences of reduced viscosity of these systems have the maxima which displaced to the left along abscissa after ultrasonic degradation or long keeping and to the right after the salt or urea addition. Na+-DNA solutions have the rheological curve of flow typical of pseudoplastical systems (RCF-1): the viscosity decreases with increasing shear rate. H+-DNA solutions undergo RCF-1 RCF-2 transition leading to reverse dependence of viscosity on shear rate after long keeping or sonicating (i. e. the systems become dilatant). At centrifugation and in shear fields RCF-2 RCF-1 transition occurs. Urea prevents both transitions. These discovered phenomena as well as weakening of the dilatant properties in concentrated H+-DNA solutions allow us to assume that in these systems exist circular structures consisting of single strands of DNA associated by means of ionic bonds between phosphates and protonated bases. Rheological behaviour of DNA obtained by the method of Georgiev and Struchkov was explained by the presence of circular double stranded DNA molecules in their preparations. The analysis of the non-equilibrium behavior of water solutions of DNA allows to determine the rate constants of H+- and Na+-DNA unwinding.