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绵羊弹性蛋白基因。一个9.9千碱基基因组克隆的分离与初步表征。

Sheep elastin genes. Isolation and preliminary characterization of a 9.9-kilobase genomic clone.

作者信息

Davidson J M, Shibahara S, Schafer M P, Harrison M, Leach C, Tolstoshev P, Crystal R G

出版信息

Biochem J. 1984 Jun 15;220(3):643-52. doi: 10.1042/bj2200643.

DOI:10.1042/bj2200643
PMID:6547835
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1153680/
Abstract

A sheep genomic library containing sheep DNA in the bacteriophage vector Charon 4A was screened for elastin-gene sequences with partially purified, 32P-labelled elastin mRNA (mRNAE). A recombinant containing a 9.9-kb (kilobase) insert was selected from several positive clones by secondary and tertiary screening for further characterization. Positive identification of this elastin clone, designated SE1, was made with radiolabelled mRNAE by hydridization-selected translation and Southern blotting of restriction-enzyme fragments of SE1 DNA. Hybridization of either mRNAE or elastin complementary DNA to restriction fragments of SE1 showed that most of these fragments of SE1 contained elastin-coding sequences. Orientation of the insert was established by preferential hybridization of a short complementary elastin DNA to restriction fragments adjacent to the right arm of Charon 4A. Reciprocal hybridizations of nick-translated SE1 and sheep genomic DNA on Southern blots showed that two restriction fragments of SE1 contained sequence elements which were repeated at high frequency in a restriction-endonuclease-EcoR1 digest of total sheep genomic DNA. In the accompanying paper [Davidson, Shibahara, Boyd, Mason, Tolstoshev & Crystal (1984) Biochem. J. 220, 653-663], it is shown that a subcloned fragment of this elastin gene quantitatively and specifically hybridized to mRNAE sequences in sheep tissue RNA. Electron microscopy of SE1-mRNAE hybrids indicated the presence of at least seven large R-loops. Measurements of these structures indicated that SE1 is likely to contain less than 2 kb of coding sequence and more than 8 kb of intervening sequence, with an average exon size of 120 base-pairs. Thus the elastin gene is distributed over an extended region of the sheep genome and contains numerous intervening and coding sequences.

摘要

用部分纯化的、经32P标记的弹性蛋白mRNA(mRNAE)筛选了一个以噬菌体载体Charon 4A构建的包含绵羊DNA的绵羊基因组文库,以寻找弹性蛋白基因序列。通过二次和三次筛选,从几个阳性克隆中挑选出一个含有9.9千碱基(kb)插入片段的重组体,用于进一步鉴定。通过杂交选择翻译和对SE1 DNA的限制性酶切片段进行Southern印迹分析,用放射性标记的mRNAE对这个名为SE1的弹性蛋白克隆进行了阳性鉴定。mRNAE或弹性蛋白互补DNA与SE1的限制性片段杂交表明,SE1的这些片段大多含有弹性蛋白编码序列。通过短的互补弹性蛋白DNA与Charon 4A右臂相邻的限制性片段的优先杂交确定了插入片段的方向。在Southern印迹上,经切口平移的SE1与绵羊基因组DNA的相互杂交表明,SE1的两个限制性片段含有在绵羊基因组DNA的限制性内切酶-EcoR1消化物中高频重复的序列元件。在随附的论文中[戴维森、柴原、博伊德、梅森、托尔斯托舍夫和克里斯特尔(1984年)《生物化学杂志》220,653 - 663],表明这个弹性蛋白基因的一个亚克隆片段与绵羊组织RNA中的mRNAE序列进行了定量和特异性杂交。SE1 - mRNAE杂交体的电子显微镜观察表明至少存在七个大的R环。对这些结构的测量表明,SE1可能含有少于2 kb的编码序列和超过8 kb的间隔序列,外显子平均大小为120个碱基对。因此,弹性蛋白基因分布在绵羊基因组的一个扩展区域,包含许多间隔序列和编码序列。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c05f/1153680/de7f9d849406/biochemj00325-0034-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c05f/1153680/f349c35f6b9b/biochemj00325-0031-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c05f/1153680/5913d325f262/biochemj00325-0032-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c05f/1153680/ac2a5a7a533b/biochemj00325-0032-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c05f/1153680/17933fa0d0b0/biochemj00325-0033-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c05f/1153680/de7f9d849406/biochemj00325-0034-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c05f/1153680/f349c35f6b9b/biochemj00325-0031-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c05f/1153680/5913d325f262/biochemj00325-0032-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c05f/1153680/ac2a5a7a533b/biochemj00325-0032-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c05f/1153680/17933fa0d0b0/biochemj00325-0033-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c05f/1153680/de7f9d849406/biochemj00325-0034-a.jpg

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本文引用的文献

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The collagen gene: evidence for its evolutinary assembly by amplification of a DNA segment containing an exon of 54 bp.胶原蛋白基因:通过扩增一个包含54个碱基对外显子的DNA片段对其进化组装的证据。
Cell. 1980 Dec;22(3):887-92. doi: 10.1016/0092-8674(80)90565-6.
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Correlation of functional elastin messenger ribonucleic acid levels and rate of elastin synthesis in the developing chick aorta.发育中的鸡主动脉中功能性弹性蛋白信使核糖核酸水平与弹性蛋白合成速率的相关性
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Translation of chick aortic elastin messenger ribonucleic acid. Comparison to elastin synthesis in chick aorta organ culture.
莫能菌素对原弹性蛋白分泌的阻断在翻译前水平抑制大鼠平滑肌细胞中原弹性蛋白的合成。
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Demonstration of elastin gene expression in human skin fibroblast cultures and reduced tropoelastin production by cells from a patient with atrophoderma.人皮肤成纤维细胞培养物中弹性蛋白基因表达的证明以及萎缩性皮肤病患者细胞中前弹性蛋白产生的减少。
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Profiles of steady state levels of messenger RNAs coding for type I procollagen, elastin, and fibronectin in hamster lungs undergoing bleomycin-induced interstitial pulmonary fibrosis.博来霉素诱导的仓鼠肺间质纤维化过程中,编码I型前胶原、弹性蛋白和纤连蛋白的信使核糖核酸稳态水平概况。
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