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袋鼠胰腺核糖核酸酶的氨基酸序列。

The amino-acid sequence of kangaroo pancreatic ribonuclease.

作者信息

Gaastra W, Welling G W, Beintema J J

出版信息

Eur J Biochem. 1978 May;86(1):209-17. doi: 10.1111/j.1432-1033.1978.tb12301.x.

Abstract

Red kangaroo (Macropus rufus) ribonuclease was isolated from pancreatic tissue by affinity chromatography. The amino acid sequence was determined by automatic sequencing of overlapping large fragments and by analysis of shorter peptides obtained by digestion with a number of proteolytic enzymes. The polypeptide chain consists of 122 amino acid residues. Compared to other ribonucleases, the N-terminal residue and residue 114 are deleted. In other pancreatic ribonucleases position 114 is occupied by a cis proline residue in an external loop at the surface of the molecule. Other remarkable substitutions are the presence of a tyrosine residue at position 123 instead of a serine which forms a hydrogen bond with the pyrimidine ring of a nucleotide substrate, and a number of hydrophobichydrophilic interchanges in the sequence 51-55, which forms part of an alpha-helix in bovine ribonuclease and exhibits few substitutions in the placental mammals. Kangaroo ribonuclease contains no carbohydrate, although the enzyme possesses a recognition site for carbohydrate attachment in the sequence Asn-Val-Thr (62-64). The enzyme differs at about 35-40% of the positions from all other mammalian pancreatic ribonucleases sequenced to date, which is in agreement with the early divergence between the marsupials and the placental mammals. From fragmentary data a tentative sequence of red-necked wallaby (Macropus rufogriseus) pancreatic ribonuclease has been derived. Eight differences with the kangaroo sequence were found.

摘要

红袋鼠(大赤袋鼠)核糖核酸酶是通过亲和层析从胰腺组织中分离出来的。通过对重叠大片段进行自动测序以及分析用多种蛋白水解酶消化得到的较短肽段来确定其氨基酸序列。该多肽链由122个氨基酸残基组成。与其他核糖核酸酶相比,N端残基和第114位残基缺失。在其他胰腺核糖核酸酶中,第114位被分子表面外部环中的一个顺式脯氨酸残基占据。其他显著的替换包括第123位存在一个酪氨酸残基而非丝氨酸,丝氨酸会与核苷酸底物的嘧啶环形成氢键,以及在序列51 - 55中有一些疏水 - 亲水交换,该序列在牛核糖核酸酶中是α - 螺旋的一部分,在胎盘哺乳动物中很少有替换。袋鼠核糖核酸酶不含碳水化合物,尽管该酶在序列Asn - Val - Thr(62 - 64)中有一个碳水化合物附着的识别位点。该酶与迄今为止测序的所有其他哺乳动物胰腺核糖核酸酶在约35% - 40%的位置上存在差异,这与有袋类动物和胎盘哺乳动物之间的早期分化一致。根据片段数据推导得出了红颈小袋鼠胰腺核糖核酸酶的初步序列。发现其与袋鼠序列有8处差异。

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