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细菌反硝化作用及反硝化菌多样性的演变

Evolution of bacterial denitrification and denitrifier diversity.

作者信息

Betlach M R

出版信息

Antonie Van Leeuwenhoek. 1982;48(6):585-607. doi: 10.1007/BF00399543.

DOI:10.1007/BF00399543
PMID:6762849
Abstract

Little is known about the role of nitrate in evolution of bacterial energy-generating mechanisms. Denitrifying bacteria are commonly regarded to have evolved from nitrate-respiring bacteria. Some researchers regard denitrification to be the precursor of aerobic respiration; others feel the opposite is true. Currently recognized denitrifying bacteria such as Hyphomicrobium, Paracoccus, Pseudomonas and Thiobacillus form a very diverse group. However, inadequate testing procedures and uncertain taxonomic identification of many isolates may have overstated the number of genera with species capable of denitrification. Nitrate reductases are structurally similar among denitrifying bacteria, but distinct from the enzymes in other nitrate-reducing organisms. Denitryfying bacteria have one of two types of nitrite reductase, either a copper-containing enzyme or an enzyme containing a cytochrome cd moiety. Both types are distinct from other nitrate reductases. Organisms capable of dissimilatory nitrate reduction are widely distributed among eubacterial groups defined by 16S ribosomal RNA phylogeny. Indeed, nitrate reduction is an almost universal property of actinomycetes and enteric organisms. However, denitrification is restricted to genera within the purple photosynthetic group. Denitrification within the genus Pseudomonas is distributed in accordance with DNA and RNA homology complexes. Denitrifiers seem to have evolved from a common ancestor within the purple photosynthetic bacterial group, but not from a nitrate-reducing organism such as those found today. Although denitrification seems to have arisen at the same time as aerobic respiration, the evolutionary relationship between the two cannot be determined at this time.

摘要

关于硝酸盐在细菌能量产生机制演化中的作用,人们了解甚少。反硝化细菌通常被认为是从硝酸盐呼吸细菌进化而来的。一些研究人员认为反硝化作用是有氧呼吸的前身;另一些人则持相反观点。目前公认的反硝化细菌,如枝动菌属、副球菌属、假单胞菌属和硫杆菌属,构成了一个非常多样化的群体。然而,测试程序不完善以及许多分离株的分类鉴定不确定,可能夸大了具有反硝化能力的属的数量。反硝化细菌中的硝酸盐还原酶在结构上相似,但与其他硝酸盐还原生物中的酶不同。反硝化细菌有两种类型的亚硝酸还原酶之一,要么是含铜酶,要么是含有细胞色素cd部分的酶。这两种类型都与其他硝酸盐还原酶不同。能够进行异化硝酸盐还原的生物广泛分布于由16S核糖体RNA系统发育定义的真细菌类群中。事实上,硝酸盐还原几乎是放线菌和肠道生物的普遍特性。然而,反硝化作用仅限于紫色光合菌群中的属。假单胞菌属内的反硝化作用根据DNA和RNA同源复合体分布。反硝化菌似乎是从紫色光合细菌群中的一个共同祖先进化而来的,而不是从像今天发现的那些硝酸盐还原生物进化而来的。尽管反硝化作用似乎与有氧呼吸同时出现,但目前尚无法确定两者之间的进化关系。

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