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[核糖核酸酶催化反应中底物核糖残基的作用]

[Role of the ribose residue of substrates in reactions catalyzed by ribonuclease].

作者信息

Avramova Z V, Dudkin S M

出版信息

Mol Biol (Mosk). 1978 Jul-Aug;12(4):914-21.

PMID:683197
Abstract

The rate constants and Km for the hydrolysis of the optically active nonglycosidic analogues of the CpA and C greater than p catalysed by RNase A and RNase BS-I were measured. The rate of hydrolysis of the model substrates in 10(5) and 10(3) slower that for the appropriate dinucleoside phosphate and nucleoside cyclophosphate. However, substitution of the relatively rigid ribofuranose ring with flexible alifatic chains is accompanied by little variation in binding constants. The analyses based on the single substrate system indicate that the observed difference in rate constants must be accounted for by a difference between the binding of the substrates in the transition state to the RNase active site. Consequently, the "rigidity" of the ribose rings in RNA leads to large decreases in the free energy of activation for the reactions catalysed by RNases.

摘要

测定了核糖核酸酶A和核糖核酸酶BS-I催化的胞嘧啶核苷-3'-磷酸(CpA)和胞嘧啶核苷-2',3'-环磷酸(C>p)的旋光性非糖苷类似物水解的速率常数和米氏常数。模型底物的水解速率比相应的二核苷磷酸和核苷环磷酸慢10⁵和10³倍。然而,用柔性脂肪链取代相对刚性的呋喃核糖环时,结合常数变化不大。基于单底物系统的分析表明,观察到的速率常数差异必须由过渡态底物与核糖核酸酶活性位点结合的差异来解释。因此,RNA中核糖环的“刚性”导致核糖核酸酶催化反应的活化自由能大幅降低。

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