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在谷氨酸-49和天冬氨酸-53处酯化的核糖核酸酶A的结构与酶活性

Structure and enzymic activity of ribonuclease-A esterified at glutamic acid-49 and aspartic acid-53.

作者信息

Acharya A S, Manjula B N, Vithayathil P J

出版信息

Biochem J. 1978 Sep 1;173(3):821-30. doi: 10.1042/bj1730821.

Abstract

The dimethyl ester of bovine pancreatic ribonuclease-A (dimethyl RNAase-A), the initial product of esterification of RNAase-A in anhydrous methanolic HCl, was isolated in a homogeneous form. The two carboxy functions esterified in this derivative are those of glutamic acid-49 and aspartic acid-53. There were no changes in the u.v.-absorption spectral characteristics, the accessibility of the methionine residues, the resistance of the protein to proteolysis by trypsin and the antigenic behaviour of RNAase-A as a result of the esterification of these two carboxy groups. Dimethyl RNAase-A exhibited only 65% of the specific activity of RNAase-A, but still had the same K(m) value for both RNA and 2':3'-cyclic CMP. However, the V(max.) was decreased by about 35%. On careful hydrolysis of the methyl ester groups at pH9.5, dimethyl RNAase-A was converted back into RNAase-A. Limited proteolysis of dimethyl RNAase-A by subtilisin resulted in the formation of an active RNAase-S-type derivative, namely dimethyl RNAase-S, which was chromatographically distinct from dimethyl RNAase-A and had very nearly the same enzymic activity as dimethyl RNAase-A. Fractionation of dimethyl RNAase-S by trichloroacetic acid yielded dimethyl RNAase-S-protein and dimethyl RNAase-S-peptide, both of which were inactive by themselves but regenerated dimethyl RNAase-S when mixed together. Dimethyl RNAase-A-peptide was identical with RNAase-S-peptide. RNAase-S-protein could be generated from dimethyl RNAase-S-protein by careful hydrolysis of the methyl ester groups at pH9.5. The interaction of dimethyl RNAase-S-protein with RNAase-S-peptide appears to be about 4-fold weaker than that between the RNAase-S-protein and RNAase-S-peptide. Conceivably, the binding of the S-peptide ;tail' of dimethyl RNAase-A with the remainder of the molecule is similarly weaker than that in RNAase-A, and this brings about subtle changes in the geometrical orientation of the active-site amino acid residues of these modified methyl ester derivatives. It is suggested that these changes could be responsible for the generation of the catalytically less-efficient RNAase-A and RNAase-S molecules (dimethyl RNAase-A and dimethyl RNAase-S respectively).

摘要

牛胰核糖核酸酶 -A(二甲基核糖核酸酶 -A)的二甲酯,即核糖核酸酶 -A在无水甲醇盐酸中酯化的初始产物,以均一形式分离得到。在该衍生物中被酯化的两个羧基功能基团分别是谷氨酸 -49和天冬氨酸 -53的羧基。由于这两个羧基的酯化作用,核糖核酸酶 -A的紫外吸收光谱特征、甲硫氨酸残基的可及性、蛋白质对胰蛋白酶蛋白水解的抗性以及抗原行为均未发生变化。二甲基核糖核酸酶 -A仅表现出核糖核酸酶 -A比活性的65%,但对RNA和2':3'-环磷酸胞苷仍具有相同的K(m)值。然而,V(max.)降低了约35%。在pH9.5条件下小心水解甲酯基团时,二甲基核糖核酸酶 -A又转化回核糖核酸酶 -A。枯草杆菌蛋白酶对二甲基核糖核酸酶 -A进行有限的蛋白水解作用,导致形成一种活性核糖核酸酶 -S型衍生物,即二甲基核糖核酸酶 -S,它在色谱上与二甲基核糖核酸酶 -A不同,并且具有与二甲基核糖核酸酶 -A非常接近的酶活性。用三氯乙酸对二甲基核糖核酸酶 -S进行分级分离,得到二甲基核糖核酸酶 -S -蛋白和二甲基核糖核酸酶 -S -肽,它们自身均无活性,但混合在一起时可再生二甲基核糖核酸酶 -S。二甲基核糖核酸酶 -A -肽与核糖核酸酶 -S -肽相同。通过在pH9.5条件下小心水解甲酯基团,可从二甲基核糖核酸酶 -S -蛋白生成核糖核酸酶 -S -蛋白。二甲基核糖核酸酶 -S -蛋白与核糖核酸酶 -S -肽之间的相互作用似乎比核糖核酸酶 -S -蛋白与核糖核酸酶 -S -肽之间的相互作用弱约4倍。可以想象,二甲基核糖核酸酶 -A的S -肽“尾巴”与分子其余部分的结合同样比核糖核酸酶 -A中的结合弱,这导致这些修饰的甲酯衍生物活性位点氨基酸残基的几何取向发生细微变化。有人认为,这些变化可能是催化效率较低的核糖核酸酶 -A和核糖核酸酶 -S分子(分别为二甲基核糖核酸酶 -A和二甲基核糖核酸酶 -S)产生的原因。

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本文引用的文献

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Mechanism and binding sites in the ribonuclease reaction. I. Kinetic studies on the second step of the reaction.
Biochem Biophys Res Commun. 1962 May 4;7:289-94. doi: 10.1016/0006-291x(62)90193-6.

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