一种描述寡聚体亚基界面形状的计算机图形方法。伴刀豆球蛋白A和前白蛋白四级结构的分析。
A computergraphical method of describing the shapes of subunit interfaces of oligomers. Analysis of the quaternary structure of concanavalin A and of prealbumin.
作者信息
Milner-White E J
出版信息
Biochem J. 1982 Aug 1;205(2):353-9. doi: 10.1042/bj2050353.
Abstract
A new method is described for mapping the shape of the intersubunit contacts of oligomers with identical subunits or pairs of subunits. Plots are generated for the dimer--dimer interactions of concanavalin A and prealbumin, which are both tetramers. Both contacts lie at the junction between the faces of two apposed beta-sheets, but in most other respects the interactions are seen to be different.
摘要
本文描述了一种用于绘制具有相同亚基或亚基对的寡聚体亚基间接触形状的新方法。文中给出了伴刀豆球蛋白A和前白蛋白（二者均为四聚体）的二聚体-二聚体相互作用图。二者的接触均位于两个相对β折叠面的交界处，但在大多数其他方面，其相互作用有所不同。
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本文引用的文献
1
Real-time color graphics in studies of molecular interactions.分子相互作用研究中的实时彩色图形
Science. 1981 Feb 13;211(4483):661-6. doi: 10.1126/science.7455704.
2
Description of the quaternary structure of tetrameric proteins. Forms that show either right-handed or left-handed symmetry at the subunit level.四聚体蛋白质四级结构的描述。在亚基水平上呈现右手或左手对称性的形式。
Biochem J. 1980 May 1;187(2):297-302. doi: 10.1042/bj1870297.
3
Structural homologies between prealbumin, gastrointestinal prohormones and other proteins.前白蛋白、胃肠激素原与其他蛋白质之间的结构同源性。
Nature. 1981 May 21;291(5812):261-3. doi: 10.1038/291261a0.
4
Prealbumin and the thyroid hormone nuclear receptor.前白蛋白与甲状腺激素核受体
Proc R Soc Lond B Biol Sci. 1981 Mar 27;211(1185):413-31. doi: 10.1098/rspb.1981.0015.
5
The interpretation of protein structures: estimation of static accessibility.蛋白质结构的解读：静态可及性的评估
J Mol Biol. 1971 Feb 14;55(3):379-400. doi: 10.1016/0022-2836(71)90324-x.
6
Structure of concanavalin A at 2.4-A resolution.伴刀豆球蛋白A在2.4埃分辨率下的结构。
Biochemistry. 1972 Dec 19;11(26):4910-9. doi: 10.1021/bi00776a006.
7
Similarity of three-dimensional structure between the immunoglobulin domain and the copper, zinc superoxide dismutase subunit.免疫球蛋白结构域与铜锌超氧化物歧化酶亚基之间三维结构的相似性。
J Mol Biol. 1976 Apr 5;102(2):221-35. doi: 10.1016/s0022-2836(76)80050-2.
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The covalent and three-dimensional structure of concanavalin A. IV. Atomic coordinates, hydrogen bonding, and quaternary structure.伴刀豆球蛋白A的共价和三维结构。IV. 原子坐标、氢键及四级结构。
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J Mol Biol. 1977 May 25;112(3):535-42. doi: 10.1016/s0022-2836(77)80200-3.
10
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J Mol Biol. 1978 May 25;121(3):339-56. doi: 10.1016/0022-2836(78)90368-6.
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