Gurd F R, Friend S H, Rothgeb T M, Gurd R S, Scouloudi H
Biophys J. 1980 Oct;32(1):65-75. doi: 10.1016/S0006-3495(80)84916-2.
The compact, largely helical structure of sperm whale and harbor seal myoglobins undergoes an abrupt one-step transition between pH 4.5 and 3.5 as monitored by changes in either the heme Soret band absorbance or circular dichroism probes of secondary structure, for which a modified Tanford-Kirkwood theory provides identification of certain dominant electrostatic interactions responsible for the loss of stability. A similar treatment permits identification of the electrostatic interactions primarily responsible for a process in which the anchoring of the A helix to other parts of the molecule is weakened. This process is detected with both myoglobins, in a pH range approximately 1 unit higher than the onset of the overall unfolding process, through changes in the circular dichroic spectra near 295 nm which correspond to the L1 O-O band of the only two tryptophan residues in these proteins, residues 7 and 14. In each case protonation of certain sites in neighboring parts of the molecule can be identified as producing destabilizing interactions with components of the A helix, particularly with lysine 6.
抹香鲸和港海豹肌红蛋白紧密的、主要为螺旋状的结构,在pH 4.5至3.5之间会经历一个突然的一步转变,这可通过血红素Soret带吸光度的变化或二级结构的圆二色性探针来监测。对于这种转变,一种改进的Tanford-Kirkwood理论能够识别出某些导致稳定性丧失的主要静电相互作用。类似的处理方法可以识别出主要导致A螺旋与分子其他部分的锚定作用减弱这一过程的静电相互作用。在两种肌红蛋白中都检测到了这个过程,其发生的pH范围比整体去折叠过程开始时的pH值高约1个单位,这是通过295 nm附近圆二色光谱的变化来检测的,该变化对应于这些蛋白质中仅有的两个色氨酸残基(第7位和第14位残基)的L1 O-O带。在每种情况下,分子相邻部分某些位点的质子化可被确定为与A螺旋的组成部分产生了不稳定的相互作用,特别是与赖氨酸6的相互作用。