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染色质中高亲和力溴化乙锭结合位点的定位

Location of the ethidium binding sites of high affinity in chromatin.

作者信息

Genest D, Sabeur G, Wahl P, Aubel-Sadron G

出版信息

Biophys Chem. 1981 Feb;13(1):89-96. doi: 10.1016/0301-4622(81)80028-2.

DOI:10.1016/0301-4622(81)80028-2
PMID:7260330
Abstract

The influence of H1 and H5 histones proteins upon the accessibility of ethidium bromide into chromatin is studied by steady-state fluorescence anisotropy in the range of r-values ([Dye]/[Phosphate]) smaller than 0.01. This corresponds to the very strong binding process. When H1 and H5 are present, the DNA segment which contains the binding sites is 25-30 base pairs long, even if H1 and H5 are digested by trypsin or by natural proteolysis, but presumably still interacting with the DNA chromatin. On the contrary, when H1 or H5 are separated from chromatin by an increase of the ionic strength, ethidium binds to a segment of DNA about 55-60 base pairs long. We may explain the results by assuming that the ethidium sites are located on a continuous segment constituting about one half of the linker, the other half interacting with H1 and H5. When chromatin is depleted from these proteins, the high affinity sites are distributed all along the linker.

摘要

通过稳态荧光各向异性研究了H1和H5组蛋白对溴化乙锭进入染色质的可及性的影响,研究范围为r值([染料]/[磷酸盐])小于0.01。这对应于非常强的结合过程。当存在H1和H5时,即使H1和H5被胰蛋白酶或自然蛋白酶消化,但可能仍与DNA染色质相互作用,含有结合位点的DNA片段长度为25 - 30个碱基对。相反,当通过增加离子强度将H1或H5与染色质分离时,溴化乙锭会结合到一段约55 - 60个碱基对长的DNA片段上。我们可以通过假设溴化乙锭位点位于构成连接体约一半的连续片段上来解释这些结果,连接体的另一半与H1和H5相互作用。当这些蛋白质从染色质中耗尽时,高亲和力位点沿连接体分布。

相似文献

1
Location of the ethidium binding sites of high affinity in chromatin.染色质中高亲和力溴化乙锭结合位点的定位
Biophys Chem. 1981 Feb;13(1):89-96. doi: 10.1016/0301-4622(81)80028-2.
2
Fluorescence anisotropy decay of ethidium bound to chromatin.与染色质结合的溴化乙锭的荧光各向异性衰减。
Biophys Chem. 1981 Feb;13(1):77-87. doi: 10.1016/0301-4622(81)80027-0.
3
Increased stability of the higher order structure of chicken erythrocyte chromatin: nanosecond anisotropy studies of intercalated ethidium.
Biochemistry. 1985 Mar 12;24(6):1291-7. doi: 10.1021/bi00327a004.
4
Ethidium bromide binding to core particle: comparison with native chromatin.溴化乙锭与核心颗粒的结合:与天然染色质的比较。
Nucleic Acids Res. 1979 Jul 25;6(10):3231-53. doi: 10.1093/nar/6.10.3231.
5
Relaxation of chromatin structure induced by ethidium binding. Involvement of the intercalation process.溴化乙锭结合诱导的染色质结构松弛。嵌入过程的参与。
Eur J Biochem. 1979 Oct 15;100(2):531-9. doi: 10.1111/j.1432-1033.1979.tb04199.x.
6
Dependence of mononucleosome deoxyribonucleic acid conformation on the deoxyribonucleic acid length and H1/H5 content. Circular dichroism and thermal denaturation studies.单核小体脱氧核糖核酸构象对脱氧核糖核酸长度及H1/H5含量的依赖性。圆二色性和热变性研究。
Biochemistry. 1980 Feb 5;19(3):532-41. doi: 10.1021/bi00544a022.
7
Relaxation of chromatin structure upon removal of histones H2A and H2B.去除组蛋白H2A和H2B后染色质结构的松弛。
FEBS Lett. 1984 Jun 25;172(1):70-4. doi: 10.1016/0014-5793(84)80876-5.
8
Involvement of the domains of histones H1 and H5 in the structural organization of soluble chromatin.组蛋白H1和H5的结构域在可溶性染色质结构组织中的作用。
J Mol Biol. 1983 Jul 5;167(3):619-40. doi: 10.1016/s0022-2836(83)80102-8.
9
Ethidium bromide as a probe of conformational heterogeneity of DNA in chromatin. The role of histone H1.溴化乙锭作为染色质中DNA构象异质性的探针。组蛋白H1的作用。
Biochemistry. 1976 Jul 27;15(15):3301-7. doi: 10.1021/bi00660a021.
10
Heterogeneity of chromatin subunits in vitro and location of histone H1.体外染色质亚基的异质性及组蛋白H1的定位
Nucleic Acids Res. 1976 Feb;3(2):477-92. doi: 10.1093/nar/3.2.477.

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Study of propidium iodide binding to DNA in intact cells by flow cytometry.
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