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烟酰胺腺嘌呤二核苷酸的3-重氮丙啶类似物衍生的卡宾对乳酸脱氢酶的光亲和标记

Photoaffinity labeling of lactate dehydrogenase by the carbene derived from the 3-diazirino analogue of nicotinamide adenine dinucleotide.

作者信息

Standring D N, Knowles J R

出版信息

Biochemistry. 1980 Jun 10;19(12):2811-6. doi: 10.1021/bi00553a042.

DOI:10.1021/bi00553a042
PMID:7397106
Abstract

The 3-diazirino analogue of NAD+, DAD+, in which the diazirine group replaces the carboxamide in an almost isosteric substitution, has been synthesized as a photoaffinity reagent for dehydrogenases. With lactate dehydrogenase, the Kdiss is 4 mM (compare the NAD+ Kdiss of 0.6 mM). On photolysis, three types of interaction can be discerned and separately quantitiated by using [3H]DAD+: noncovalent binding of the photoproducts of DAD+, which is removed by protein denaturation; nonspecific covalent labeling, which is eliminated by the presence of a scavenger such as glutathione; specific covalent labeling at the active site, which is prevented by competition from the natural ligands. The photolabeling efficiency (sites covalently labeled/sites initially occupied) is approximately 0.3. It is evident that the carbene generated from DAD+ is more effective than that from the more bulky 3-diazoacetate or than the less reactive nitrene derived from the 3-azido-NAD+ analogue.

摘要

NAD+的3-重氮丙啶类似物DAD+,其中重氮丙啶基团取代了羧酰胺,几乎是等排取代,已被合成为脱氢酶的光亲和试剂。对于乳酸脱氢酶,解离常数Kdiss为4 mM(相比之下,NAD+的Kdiss为0.6 mM)。光解时,通过使用[3H]DAD+可识别并分别定量三种相互作用:DAD+光产物的非共价结合,可通过蛋白质变性去除;非特异性共价标记,可通过存在诸如谷胱甘肽的清除剂消除;活性位点的特异性共价标记,可通过天然配体的竞争阻止。光标记效率(共价标记的位点/最初占据的位点)约为0.3。很明显,由DAD+产生的卡宾比由体积更大的3-重氮乙酸酯产生的卡宾或由3-叠氮基-NAD+类似物衍生的活性较低的氮烯更有效。

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