Kortemme T, Creighton T E
European Molecular Biology Laboratory, Heidelberg, Germany.
J Mol Biol. 1995 Nov 10;253(5):799-812. doi: 10.1006/jmbi.1995.0592.
The physical basis of the unusually low pKa values of an active site cysteine thiol group in proteins with the thioredoxin fold is unknown. The electrostatic field associated with an alpha-helix pointing with its N terminus towards the cysteine residue has been implicated to lower the thiol pKa value by up to 5 pH units in glutaredoxin and DsbA. Here, the influence of the presence of an alpha-helical conformation on the ionisation of a cysteine thiol group located at or near the helix terminus is investigated in highly helical synthetic peptides with the generic sequence Ac-AAAAAAAAARAAAARAAAARAA-(NH2). The thiol pKa values have been determined by monitoring the pH dependence of the absorbance at 240 nm, of the alpha-helix content measured by the mean residue ellipticity at 222 nm, and of the chemical shifts of protons close to the sulphur atom of the cysteine residue. The favourable interaction between the thiolate anion at the N terminus and the alpha-helix decreases the thiol pKa value by up to 1.6 pH units when compared to a normal thiol pKa value measured in an unfolded control peptide, corresponding to a stabilisation energy of 2.1 kcal/mol. At the C terminus, the thiol pKa value is increased, but by only 0.2 pH units. The observations are consistent with an interaction of the alpha-helix dipole with the cysteine thiolate anion, involving both its charge and hydrogen-bonding. Subtle conformational effects in different model peptides appear to influence the ionisation of the thiol group significantly, with an N terminal Cys-Pro sequence having the most favourable interaction with the alpha-helix.
具有硫氧还蛋白折叠的蛋白质中,活性位点半胱氨酸硫醇基团的pKa值异常低,其物理基础尚不清楚。在谷氧还蛋白和DsbA中,与N端指向半胱氨酸残基的α-螺旋相关的静电场被认为可使硫醇pKa值降低多达5个pH单位。在此,我们在具有通用序列Ac-AAAAAAAAARAAAARAAAARAA-(NH2)的高度螺旋化合成肽中,研究了α-螺旋构象的存在对位于螺旋末端或其附近的半胱氨酸硫醇基团电离的影响。通过监测240 nm处吸光度的pH依赖性、222 nm处平均残基椭圆率测量的α-螺旋含量以及靠近半胱氨酸残基硫原子的质子化学位移,确定了硫醇pKa值。与在未折叠对照肽中测得的正常硫醇pKa值相比,N端硫醇阴离子与α-螺旋之间的有利相互作用使硫醇pKa值降低多达1.6个pH单位,对应于2.1 kcal/mol的稳定化能。在C端,硫醇pKa值升高,但仅升高0.2个pH单位。这些观察结果与α-螺旋偶极与半胱氨酸硫醇阴离子的相互作用一致,涉及电荷和氢键。不同模型肽中的细微构象效应似乎对硫醇基团的电离有显著影响,N端Cys-Pro序列与α-螺旋的相互作用最为有利。