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在存在螺旋稳定剂、硫氰酸盐、对羟基苯甲酸甲酯和苯酚的情况下对六聚体胰岛素进行的X射线晶体学研究。

X-ray crystallographic studies on hexameric insulins in the presence of helix-stabilizing agents, thiocyanate, methylparaben, and phenol.

作者信息

Whittingham J L, Chaudhuri S, Dodson E J, Moody P C, Dodson G G

机构信息

Department of Chemistry, University of York, Heslington, England.

出版信息

Biochemistry. 1995 Nov 28;34(47):15553-63. doi: 10.1021/bi00047a022.

Abstract

Three X-ray crystallographic studies have been carried out on pig insulin in the presence of three ligands, thiocyanate, methylparaben (methyl p-hydroxybenzoate), and phenol. In each case, rhombohedral crystals were obtained, which diffracted to 1.8, 1.9, and 2.3 A, respectively. Each crystal structure was very similar to that of 4-zinc pig insulin, which was used as a starting model for PROLSQ refinement (Collaborative Computational Project, Number 4, 1994). The R factors for the refined structures of thiocyanate insulin, methylparaben insulin, and phenol insulin were 19.6, 18.4, and 19.1, respectively. Each crystal structure consists of T3R3f insulin hexamers with two zinc ions per hexamer. In the R3f trimer of the thiocyanate insulin hexamer, one thiocyanate ion is coordinated to the zinc on the hexamer 3-fold axis, but there is no evidence of zinc ion binding in the off-axis zinc ion sites seen in the 4-zinc pig insulin structure. In the methylparaben insulin and phenol insulin hexamers, the phenolic ligands are bound at the dimer-dimer interfaces in the R3f trimers in a manner similar to that of phenol in R6 phenol insulin. The binding of methylparaben appears to make the hexamer more compact by drawing the A and the B chains closer together in the binding site. In all three structures presented herein, the conformations of the first three residues of the B chain in the R3f trimer are extended rather than alpha-helical, as is seen in R6 phenol insulin. The energetics of ligand binding in the insulin hexamer are discussed.

摘要

已在三种配体(硫氰酸盐、对羟基苯甲酸甲酯和苯酚)存在的情况下对猪胰岛素进行了三项X射线晶体学研究。在每种情况下,均获得了菱形晶体,其衍射分辨率分别为1.8、1.9和2.3埃。每个晶体结构都与4-锌猪胰岛素的结构非常相似,4-锌猪胰岛素被用作PROLSQ精修的起始模型(协作计算项目,第4号,1994年)。硫氰酸盐胰岛素、对羟基苯甲酸甲酯胰岛素和苯酚胰岛素精制结构的R因子分别为19.6、18.4和19.1。每个晶体结构均由T3R3f胰岛素六聚体组成,每个六聚体含有两个锌离子。在硫氰酸盐胰岛素六聚体的R3f三聚体中,一个硫氰酸根离子与六聚体3重轴上的锌配位,但没有证据表明在4-锌猪胰岛素结构中看到的离轴锌离子位点存在锌离子结合。在对羟基苯甲酸甲酯胰岛素和苯酚胰岛素六聚体中,酚类配体以类似于R6苯酚胰岛素中苯酚的方式结合在R3f三聚体的二聚体-二聚体界面处。对羟基苯甲酸甲酯的结合似乎通过使结合位点中的A链和B链靠得更近而使六聚体更紧凑。在本文给出的所有三种结构中,R3f三聚体中B链前三个残基的构象是伸展的,而不是α-螺旋的,这与R6苯酚胰岛素中的情况相同。本文讨论了胰岛素六聚体中配体结合的能量学。

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