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大肠杆菌起始tRNA的结构与功能之间的关系

Relationship between the structure and function of Escherichia coli initiator tRNA.

作者信息

Dyson M R, Mandal N, RajBhandary U L

机构信息

Institute of Cell and Molecular Biology, University of Edinburgh, UK.

出版信息

Biochimie. 1993;75(12):1051-60. doi: 10.1016/0300-9084(93)90004-c.

DOI:10.1016/0300-9084(93)90004-c
PMID:7515283
Abstract

Through functional studies of mutant tRNAs, we have identified sequence and/or structural features important for specifying the many distinctive properties of E coli initiator tRNA. Many of the mutant tRNAs contain an anticodon sequence change from CAU-->CUA and are now substrates for E coli glutaminyl-tRNA synthetase (GlnRS). We describe here the effect of further mutating the discriminator base 73 and nucleotide 72 at the end of the acceptor stem on: i) recognition of the mutant tRNAs by E coli GlnRS; ii) recognition by E coli methionyl-tRNA transformylase; and iii) activity of the mutant tRNAs in initiation in E coli. For GlnRS recognition, our results are, in general, consistent with interactions found in the crystal structure of the E coli GlnRS-glutamine tRNA complex. The results also support our previous conclusion that formylation of initiator tRNA is important for its function in initiation.

摘要

通过对突变tRNA的功能研究,我们确定了对指定大肠杆菌起始tRNA的许多独特特性至关重要的序列和/或结构特征。许多突变tRNA的反密码子序列从CAU变为CUA,现在是大肠杆菌谷氨酰胺tRNA合成酶(GlnRS)的底物。我们在此描述进一步突变受体茎末端的判别碱基73和核苷酸72对以下方面的影响:i)大肠杆菌GlnRS对突变tRNA的识别;ii)大肠杆菌甲硫氨酰-tRNA转甲酰基酶的识别;iii)突变tRNA在大肠杆菌起始过程中的活性。对于GlnRS识别,我们的结果总体上与大肠杆菌GlnRS-谷氨酰胺tRNA复合物晶体结构中发现的相互作用一致。这些结果也支持我们之前的结论,即起始tRNA的甲酰化对其起始功能很重要。

相似文献

1
Relationship between the structure and function of Escherichia coli initiator tRNA.大肠杆菌起始tRNA的结构与功能之间的关系
Biochimie. 1993;75(12):1051-60. doi: 10.1016/0300-9084(93)90004-c.
2
Anticodon sequence mutants of Escherichia coli initiator tRNA: effects of overproduction of aminoacyl-tRNA synthetases, methionyl-tRNA formyltransferase, and initiation factor 2 on activity in initiation.大肠杆菌起始tRNA的反密码子序列突变体:氨酰-tRNA合成酶、甲硫氨酰-tRNA甲酰基转移酶和起始因子2过量表达对起始活性的影响
Biochemistry. 2003 May 6;42(17):4787-99. doi: 10.1021/bi034011r.
3
Structural and sequence elements important for recognition of Escherichia coli formylmethionine tRNA by methionyl-tRNA transformylase are clustered in the acceptor stem.甲硫氨酰 -tRNA转甲酰基酶识别大肠杆菌甲酰甲硫氨酸tRNA的重要结构和序列元件聚集在受体茎中。
J Biol Chem. 1991 Sep 25;266(27):18012-7.
4
Striking effects of coupling mutations in the acceptor stem on recognition of tRNAs by Escherichia coli Met-tRNA synthetase and Met-tRNA transformylase.
Proc Natl Acad Sci U S A. 1992 Oct 1;89(19):9262-6. doi: 10.1073/pnas.89.19.9262.
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Escherichia coli initiator tRNA: structure-function relationships and interactions with the translational machinery.大肠杆菌起始tRNA:结构-功能关系及其与翻译机制的相互作用。
Biochem Cell Biol. 1995 Nov-Dec;73(11-12):1023-31. doi: 10.1139/o95-109.
6
Role of methionine and formylation of initiator tRNA in initiation of protein synthesis in Escherichia coli.甲硫氨酸和起始tRNA的甲酰化在大肠杆菌蛋白质合成起始中的作用。
J Bacteriol. 1992 Dec;174(23):7819-26. doi: 10.1128/jb.174.23.7819-7826.1992.
7
Suppression of amber codons in vivo as evidence that mutants derived from Escherichia coli initiator tRNA can act at the step of elongation in protein synthesis.体内琥珀密码子的抑制作用表明,源自大肠杆菌起始tRNA的突变体可在蛋白质合成的延伸步骤中发挥作用。
J Biol Chem. 1989 Apr 15;264(11):6504-8.
8
Selectivity and specificity in the recognition of tRNA by E coli glutaminyl-tRNA synthetase.大肠杆菌谷氨酰胺-tRNA合成酶对tRNA识别的选择性和特异性
Biochimie. 1993;75(12):1083-90. doi: 10.1016/0300-9084(93)90007-f.
9
Escherichia coli proline tRNA: structure and recognition sites for prolyl-tRNA synthetase.大肠杆菌脯氨酸转运核糖核酸:脯氨酰转运核糖核酸合成酶的结构与识别位点
Nucleic Acids Symp Ser. 2000(44):7-8. doi: 10.1093/nass/44.1.7.
10
Importance of formylability and anticodon stem sequence to give a tRNA(Met) an initiator identity in Escherichia coli.甲酰化能力和反密码子茎序列对于赋予大肠杆菌中tRNA(Met)起始子身份的重要性。
J Bacteriol. 1993 Jul;175(14):4507-14. doi: 10.1128/jb.175.14.4507-4514.1993.

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Suppressor mutations in Escherichia coli methionyl-tRNA formyltransferase: role of a 16-amino acid insertion module in initiator tRNA recognition.大肠杆菌甲硫氨酰 - tRNA甲酰转移酶中的抑制突变:16个氨基酸插入模块在起始tRNA识别中的作用。
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