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通过全基因组扩增对多个基因座进行植入前单细胞分析。

Preimplantation single-cell analysis of multiple genetic loci by whole-genome amplification.

作者信息

Snabes M C, Chong S S, Subramanian S B, Kristjansson K, DiSepio D, Hughes M R

机构信息

Institute for Molecular Genetics, Baylor College of Medicine, Houston, TX 77030.

出版信息

Proc Natl Acad Sci U S A. 1994 Jun 21;91(13):6181-5. doi: 10.1073/pnas.91.13.6181.

DOI:10.1073/pnas.91.13.6181
PMID:7517043
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC44162/
Abstract

Due to the limited amount of DNA in a single diploid cell, preimplantation genetic diagnosis has relied on single- or dual-locus analyses in biopsied blastomers. We have applied single-cell whole-genome preamplification to PCR-based analysis of multiple disease loci from the same diploid cell. This method allows diagnosis of multiple disease genes, analysis of multiple exons/introns within a gene, or corroborative embryo-sex assignment and specific mutation detection at sex-linked loci. A blinded study of six genetic loci was performed with whole-genome preamplification followed by nested PCR. Amplification was observed in 103 of 105 assays (98%) and a correct diagnosis was made in 98%. All human blastomeres were correctly diagnosed (100%) at loci where the genotype could be confirmed, attesting to the reliability of the technique. Preamplification has now been applied successfully to the analysis of the two major mutations responsible for Tay-Sachs disease and of a common restriction polymorphism in the gene responsible for hemophilia A. The fidelity and length of product derived from this preamplification step make it an appealing technique for preimplantation genetic diagnoses requiring analyses at more than one locus.

摘要

由于单个二倍体细胞中的DNA数量有限,植入前基因诊断依赖于对活检的卵裂球进行单基因座或双基因座分析。我们已将单细胞全基因组预扩增应用于对来自同一二倍体细胞的多个疾病基因座进行基于PCR的分析。该方法可诊断多个疾病基因,分析基因内的多个外显子/内含子,或进行确证性胚胎性别鉴定以及检测性连锁基因座处的特定突变。对六个基因座进行了一项盲法研究,采用全基因组预扩增,随后进行巢式PCR。在105次检测中有103次(98%)观察到扩增,正确诊断率为98%。在可以确认基因型的基因座上,所有人类卵裂球均被正确诊断(100%),证明了该技术的可靠性。预扩增现已成功应用于分析导致泰-萨克斯病的两个主要突变以及导致甲型血友病的基因中的一个常见限制性多态性。该预扩增步骤产生的产物的保真度和长度使其成为一种有吸引力的技术,适用于需要在多个基因座进行分析的植入前基因诊断。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eef4/44162/3aef05ef8b25/pnas01135-0459-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eef4/44162/92735e591503/pnas01135-0458-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eef4/44162/564607a1b80a/pnas01135-0458-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eef4/44162/5a7c2b8eabe6/pnas01135-0459-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eef4/44162/3aef05ef8b25/pnas01135-0459-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eef4/44162/92735e591503/pnas01135-0458-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eef4/44162/564607a1b80a/pnas01135-0458-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eef4/44162/5a7c2b8eabe6/pnas01135-0459-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eef4/44162/3aef05ef8b25/pnas01135-0459-b.jpg

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本文引用的文献

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Hum Mol Genet. 1993 Aug;2(8):1187-91. doi: 10.1093/hmg/2.8.1187.
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Preimplantation single cell analyses of dystrophin gene deletions using whole genome amplification.使用全基因组扩增技术对肌营养不良蛋白基因缺失进行植入前单细胞分析。
Nat Genet. 1994 Jan;6(1):19-23. doi: 10.1038/ng0194-19.
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Amplification and analysis of DNA sequences in single human sperm and diploid cells.
用于高通量单核苷酸多态性和短串联重复序列基因分型的激光捕获显微切割组织DNA的全基因组扩增。
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Comprehensive human genome amplification using multiple displacement amplification.使用多重置换扩增技术进行全基因组扩增
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Molecular diagnostics in preimplantation genetic diagnosis.植入前基因诊断中的分子诊断学
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Paired cloning of the T cell receptor alpha and beta genes from a single T cell without the establishment of a T cell clone.在不建立T细胞克隆的情况下,从单个T细胞中对T细胞受体α和β基因进行配对克隆。
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