• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

溶菌酶折叠中的动力学陷阱。

Kinetic traps in lysozyme folding.

作者信息

Kiefhaber T

机构信息

Abteilung Biophysikalische Chemie, Universität Basel, Switzerland.

出版信息

Proc Natl Acad Sci U S A. 1995 Sep 26;92(20):9029-33. doi: 10.1073/pnas.92.20.9029.

DOI:10.1073/pnas.92.20.9029
PMID:7568066
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC40917/
Abstract

Folding of lysozyme from hen egg white was investigated by using interrupted refolding experiments. This method makes use of a high energy barrier between the native state and transient folding intermediates, and, in contrast to conventional optical techniques, it enables one to specifically monitor the amount of native molecules during protein folding. The results show that under strongly native conditions lysozyme can refold on parallel pathways. The major part of the lysozyme molecules (86%) refold on a slow kinetic pathway with well-populated partially folded states. Additionally, 14% of the molecules fold faster. The rate constant of formation of native molecules on the fast pathway corresponds well to the rate constant expected for folding to occur by a two-state process without any detectable intermediates. The results suggest that formation of the native state for the major fraction of lysozyme molecules is retarded compared with the direct folding process. Partially structured intermediates that transiently populate seem to be kinetically trapped in a conformation that can only slowly reach the native structure.

摘要

通过使用中断复性实验研究了鸡蛋清溶菌酶的折叠过程。该方法利用了天然状态与瞬时折叠中间体之间的高能垒,并且与传统光学技术不同,它能够在蛋白质折叠过程中特异性地监测天然分子的数量。结果表明,在强天然条件下,溶菌酶可以通过平行途径复性。大部分溶菌酶分子(86%)通过一条具有大量部分折叠状态的缓慢动力学途径复性。此外,14%的分子折叠得更快。快速途径上天然分子形成的速率常数与通过无任何可检测中间体的两态过程发生折叠所预期的速率常数非常吻合。结果表明,与直接折叠过程相比,大部分溶菌酶分子天然状态的形成受到了阻碍。短暂存在的部分结构化中间体似乎在动力学上被困在一种只能缓慢达到天然结构的构象中。

相似文献

1
Kinetic traps in lysozyme folding.溶菌酶折叠中的动力学陷阱。
Proc Natl Acad Sci U S A. 1995 Sep 26;92(20):9029-33. doi: 10.1073/pnas.92.20.9029.
2
Kinetics of folding of guanidine-denatured hen egg white lysozyme and carboxymethyl(Cys6,Cys127)-lysozyme: a stopped-flow absorbance and fluorescence study.胍变性的鸡蛋清溶菌酶和羧甲基(半胱氨酸6,半胱氨酸127)-溶菌酶的折叠动力学:停流吸光度和荧光研究
Biochemistry. 1994 Sep 20;33(37):11225-36. doi: 10.1021/bi00203a019.
3
Role of non-native aromatic and hydrophobic interactions in the folding of hen egg white lysozyme.非天然芳香族和疏水相互作用在鸡蛋清溶菌酶折叠中的作用。
Biochemistry. 1996 Oct 29;35(43):13797-807. doi: 10.1021/bi9608119.
4
Three-state model for lysozyme folding: triangular folding mechanism with an energetically trapped intermediate.溶菌酶折叠的三态模型:具有能量捕获中间体的三角折叠机制。
J Mol Biol. 1997 Jul 11;270(2):294-304. doi: 10.1006/jmbi.1997.1030.
5
Are there equilibrium intermediate states in the urea-induced unfolding of hen egg-white lysozyme?在尿素诱导的鸡蛋清溶菌酶去折叠过程中是否存在平衡中间态?
Biochemistry. 1997 Aug 5;36(31):9616-24. doi: 10.1021/bi9703305.
6
A salt-induced kinetic intermediate is on a new parallel pathway of lysozyme folding.盐诱导的动力学中间体处于溶菌酶折叠的一条新的平行途径上。
Biochemistry. 1999 Sep 21;38(38):12460-70. doi: 10.1021/bi9909703.
7
Comparison of the refolding of hen lysozyme from dimethyl sulfoxide and guanidinium chloride.来自二甲基亚砜和氯化胍的溶菌酶复性的比较。
Biochemistry. 1995 Feb 7;34(5):1714-24. doi: 10.1021/bi00005a028.
8
Thermal unfolding of an intermediate is associated with non-Arrhenius kinetics in the folding of hen lysozyme.在鸡卵清溶菌酶折叠过程中,中间体的热解折叠与非阿累尼乌斯动力学相关。
J Mol Biol. 2000 Mar 17;297(1):193-210. doi: 10.1006/jmbi.2000.3540.
9
Characterization of the folding and unfolding reactions of single-chain monellin: evidence for multiple intermediates and competing pathways.单链莫内林折叠与去折叠反应的表征:多中间体和竞争途径的证据
Biochemistry. 2007 Oct 23;46(42):11727-43. doi: 10.1021/bi701142a. Epub 2007 Sep 29.
10
Cooperative folding of the isolated alpha-helical domain of hen egg-white lysozyme.鸡蛋清溶菌酶分离的α-螺旋结构域的协同折叠
J Mol Biol. 2001 Nov 23;314(2):321-9. doi: 10.1006/jmbi.2001.5122.

引用本文的文献

1
G-quadruplexes and their unexpected ability to fold proteins.G-四链体及其折叠蛋白质的意外能力。
Proc Natl Acad Sci U S A. 2025 Mar 18;122(11):e2501246122. doi: 10.1073/pnas.2501246122. Epub 2025 Mar 10.
2
Mechanisms and pathology of protein misfolding and aggregation.蛋白质错误折叠和聚集的机制和病理学。
Nat Rev Mol Cell Biol. 2023 Dec;24(12):912-933. doi: 10.1038/s41580-023-00647-2. Epub 2023 Sep 8.
3
Protein folding problem: enigma, paradox, solution.蛋白质折叠问题:谜团、悖论与解决方案。
Biophys Rev. 2022 Oct 11;14(6):1255-1272. doi: 10.1007/s12551-022-01000-1. eCollection 2022 Dec.
4
Protein Unfolding in Freeze Frames: Intermediate States are Revealed by Variable-Temperature Ion Mobility-Mass Spectrometry.蛋白质在冷冻状态下的展开:通过变温离子淌度-质谱法揭示中间状态。
Anal Chem. 2022 Sep 6;94(35):12248-12255. doi: 10.1021/acs.analchem.2c03066. Epub 2022 Aug 24.
5
Open-Bundle Structure as the Unfolding Intermediate of Cytochrome ' Revealed by Small Angle Neutron Scattering.开环结构作为细胞色素 '的展开中间体通过小角中子散射揭示。
Biomolecules. 2022 Jan 7;12(1):95. doi: 10.3390/biom12010095.
6
Towards a generic prototyping approach for therapeutically-relevant peptides and proteins in a cell-free translation system.朝着在无细胞翻译系统中针对治疗相关肽和蛋白质的通用原型方法发展。
Nat Commun. 2022 Jan 11;13(1):260. doi: 10.1038/s41467-021-27854-9.
7
N-Terminal Decarboxylation as a Probe for Intramolecular Contact Formation in γ-Glu-(Pro)-Met Peptides.N-端脱羧作用作为γ-谷氨酰-(脯氨酸)-甲硫氨酸肽分子内接触形成的探针。
J Phys Chem B. 2020 Sep 17;124(37):8082-8098. doi: 10.1021/acs.jpcb.0c04371. Epub 2020 Sep 2.
8
Transmembrane protein rotaxanes reveal kinetic traps in the refolding of translocated substrates.跨膜蛋白轮烷揭示了易位底物重折叠过程中的动力学陷阱。
Commun Biol. 2020 Apr 3;3(1):159. doi: 10.1038/s42003-020-0840-5.
9
Iterative annealing mechanism explains the functions of the GroEL and RNA chaperones.迭代退火机制解释了 GroEL 和 RNA 伴侣的功能。
Protein Sci. 2020 Feb;29(2):360-377. doi: 10.1002/pro.3795. Epub 2019 Dec 23.
10
The Effect of Dimethyl Sulfoxide on the Lysozyme Unfolding Kinetics, Thermodynamics, and Mechanism.二甲基亚砜对溶菌酶展开动力学、热力学和机制的影响。
Biomolecules. 2019 Sep 29;9(10):547. doi: 10.3390/biom9100547.

本文引用的文献

1
Protein folding bottlenecks: A lattice Monte Carlo simulation.蛋白质折叠瓶颈:晶格蒙特卡罗模拟
Phys Rev Lett. 1991 Sep 16;67(12):1665-1668. doi: 10.1103/PhysRevLett.67.1665.
2
Kinetics and thermodynamics of folding in model proteins.模型蛋白折叠的动力学与热力学
Proc Natl Acad Sci U S A. 1993 Jul 1;90(13):6369-72. doi: 10.1073/pnas.90.13.6369.
3
Detection of transient protein folding populations by mass spectrometry.通过质谱法检测瞬时蛋白质折叠群体
Science. 1993 Nov 5;262(5135):896-900. doi: 10.1126/science.8235611.
4
Tertiary interactions in the folding pathway of hen lysozyme: kinetic studies using fluorescent probes.母鸡溶菌酶折叠途径中的三级相互作用:使用荧光探针的动力学研究。
Biochemistry. 1994 May 3;33(17):5212-20. doi: 10.1021/bi00183a026.
5
Non-prolyl cis-trans peptide bond isomerization as a rate-determining step in protein unfolding and refolding.非脯氨酰顺反肽键异构化作为蛋白质解折叠和重折叠中的限速步骤。
J Mol Biol. 1995 Jan 6;245(1):69-78. doi: 10.1016/s0022-2836(95)80039-5.
6
How does a protein fold?蛋白质是如何折叠的?
Nature. 1994 May 19;369(6477):248-51. doi: 10.1038/369248a0.
7
The nature of protein folding pathways: the classical versus the new view.蛋白质折叠途径的本质:传统观点与新观点
J Biomol NMR. 1995 Feb;5(2):103-9. doi: 10.1007/BF00208801.
8
The barriers in protein folding.蛋白质折叠中的障碍。
Nat Struct Biol. 1994 Mar;1(3):149-56. doi: 10.1038/nsb0394-149.
9
The energetic ups and downs of protein folding.
Nat Struct Biol. 1994 Mar;1(3):135-8. doi: 10.1038/nsb0394-135.
10
Amino acid replacement that eliminates kinetic traps in the folding pathway of pancreatic trypsin inhibitor.消除胰腺胰蛋白酶抑制剂折叠途径中动力学陷阱的氨基酸置换。
Biochemistry. 1993 Dec 28;32(51):14075-81. doi: 10.1021/bi00214a001.