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转移核Overhauser增强实验表明,单克隆抗体strep 9选择了A组链球菌三糖半抗原的局部最小构象。

Transferred nuclear Overhauser enhancement experiments show that the monoclonal antibody strep 9 selects a local minimum conformation of a Streptococcus group A trisaccharide-hapten.

作者信息

Weimar T, Harris S L, Pitner J B, Bock K, Pinto B M

机构信息

Department of Chemistry, Simon Fraser University, Burnaby, British Columbia, Canada.

出版信息

Biochemistry. 1995 Oct 17;34(41):13672-81. doi: 10.1021/bi00041a049.

Abstract

Transferred nuclear Overhauser enhancement (TRNOE) experiments have been performed to investigate the bound conformation of the trisaccharide repeating unit of the Streptococcus Group A cell-wall polysaccharide. Thus, the conformations of propyl 3-O-(2-acetamido-2-deoxy-beta-D-glucopyranosyl)-2-O-(alpha-L-rhamnopyran osyl)- alpha-L-rhamnopyranoside [C(A')B] (1) as a free ligand and when complexed to the monoclonal antibody Strep 9 were examined. Improved insights about the conformational preferences of the glycosidic linkages of the trisaccharide ligand showed that the free ligand populates various conformations in aqueous solution, thus displaying relatively flexible behavior. The NOE HNAc-H2A', which was not detected in previous work, accounts for a conformation at the beta-(1-->3) linkage with a phi angle of approximately 180 degrees. Observed TRNOEs for the complex are weak, and their analysis was further complicated by spin diffusion. With the use of transferred rotating-frame Overhauser enhancement (TRROE) experiments, the amount of spin diffusion was assessed experimentally, proving that all of the observed long-range TRNOEs arose through spin diffusion. Four interglycosidic distances, derived from the remaining TRNOEs and TRROEs, together with repulsive constraints, derived from the absence of TRROE effects, were used as input parameters in simulated annealing and molecular mechanics calculations to determine the bound conformation of the trisaccharide. Complexation by the antibody results in the selection of one defined conformation of the carbohydrate hapten. This bound conformation, which is a local energy minimum on the energy maps calculated for the trisaccharide ligand, shows only a change from a +gauche to a -gauche orientation at the psi angle of the alpha-(1-->2) linkage when compared to the global minimum conformation. The results infer that the bound conformation of the Streptococcus Group A cell-wall polysaccharide is different from its previously proposed solution structure (Kreis et al., 1995).

摘要

已进行转移核Overhauser增强(TRNOE)实验来研究A组链球菌细胞壁多糖三糖重复单元的结合构象。因此,研究了丙基3 - O -(2 - 乙酰氨基 - 2 - 脱氧 - β - D - 吡喃葡萄糖基)- 2 - O -(α - L - 鼠李吡喃糖基)- α - L - 鼠李吡喃糖苷[C(A')B](1)作为游离配体以及与单克隆抗体Strep 9络合时的构象。对三糖配体糖苷键构象偏好的深入了解表明,游离配体在水溶液中呈现多种构象,因此表现出相对灵活的行为。在先前的工作中未检测到的NOE HNAc - H2A',对应于β -(1→3)键处约180度的φ角构象。观察到的复合物的TRNOE较弱,并且自旋扩散使其分析更加复杂。通过使用转移旋转框架Overhauser增强(TRROE)实验,通过实验评估了自旋扩散的量,证明所有观察到的长程TRNOE都是通过自旋扩散产生的。从其余的TRNOE和TRROE得出的四个糖苷间距离,以及由于不存在TRROE效应而得出的排斥性限制,被用作模拟退火和分子力学计算中的输入参数,以确定三糖的结合构象。抗体的络合导致选择碳水化合物半抗原的一种确定构象。与全局最小构象相比,这种结合构象是为三糖配体计算的能量图上的局部能量最小值,仅在α -(1→2)键的ψ角处从 +gauche取向变为 -gauche取向。结果推断,A组链球菌细胞壁多糖的结合构象与其先前提出的溶液结构(Kreis等人,1995年)不同。

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