Burgess S A
Department of Physiology, School of Medical Sciences, University of Bristol, UK.
J Mol Biol. 1995 Jun 30;250(1):52-63. doi: 10.1006/jmbi.1995.0357.
A method of image classification based on multivariate statistics has been developed and applied to freeze-etch images of outer dynein arms (ODAs) from cockerel sperm flagella. Demembranated flagella were cryofixed in three different nucleotide states: rigor (i.e. no added ATP); relaxed (i.e. 1 mM ATP plus vanadate); and active (i.e. 1 mM ATP). Freeze-etch replica fragments from them were coded to conceal their identities and sampled for flagella. From these a total of 6048 individual ODA images were successfully windowed and aligned, covering an angular range of 66 degrees. Each nucleotide condition produced a statistically significant ODA morphology. The relaxed and active morphologies differed only in the angulation of their heads, with the relaxed ODA favouring a more tilted position. The rigor morphology was more distinct and showed a conformational change involving a 12 nm distal shift relative to the A-tubule and highly variable heads and B-links, suggesting an ability to develop tension. Outer arms were classified by discriminant analysis as being either rigor-like, relaxed-like or active-like, and 80% of all ODAs were correctly classified. The misclassification of the remaining 20% indicated morphological heterogeneity in some of the groups. From the rigor group, 8.8% of the ODAs were misclassified as relaxed-like or active-like (i.e. non-rigor-like). It is speculated that this is a consequence of mechanochemical interactions between the B-tubules and the rigor ODAs and/or contaminating ATP remaining after demembranation. Active flagella were found to show all three morphologies, with 5.4% in the rigor conformation and 18.6% in the relaxed conformation. The finding of rigor-like and relaxed-like ODAs in flagella exposed to ATP is discussed in relation to the cross-bridge cycle.
一种基于多元统计的图像分类方法已被开发出来,并应用于公鸡精子鞭毛外动力蛋白臂(ODA)的冷冻蚀刻图像。去膜鞭毛在三种不同的核苷酸状态下进行冷冻固定:僵直状态(即不添加ATP);松弛状态(即1 mM ATP加钒酸盐);以及活性状态(即1 mM ATP)。对来自这些状态的冷冻蚀刻复制品片段进行编码以隐藏其身份,并对鞭毛进行采样。从中成功地对总共6048个单独的ODA图像进行了开窗和对齐,覆盖的角度范围为66度。每种核苷酸状态都产生了具有统计学意义的ODA形态。松弛状态和活性状态的形态仅在其头部的角度上有所不同,松弛状态的ODA头部更倾向于倾斜位置。僵直状态的形态更明显,显示出一种构象变化,包括相对于A微管向远端移动12 nm以及高度可变的头部和B链,这表明其具有产生张力的能力。通过判别分析将外臂分类为类似僵直状态、类似松弛状态或类似活性状态,所有ODA中有80%被正确分类。其余20%的错误分类表明某些组中存在形态异质性。在僵直状态组中,8.8%的ODA被错误分类为类似松弛状态或类似活性状态(即非僵直状态)。据推测,这是B微管与僵直状态的ODA之间机械化学相互作用和/或去膜后残留的污染性ATP的结果。发现活性鞭毛呈现出所有三种形态,其中5.4%处于僵直构象,18.6%处于松弛构象。结合横桥循环讨论了在暴露于ATP的鞭毛中发现类似僵直状态和类似松弛状态的ODA这一现象。