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肌营养不良蛋白编码区小突变的谱系

Spectrum of small mutations in the dystrophin coding region.

作者信息

Prior T W, Bartolo C, Pearl D K, Papp A C, Snyder P J, Sedra M S, Burghes A H, Mendell J R

机构信息

Department of Pathology, Ohio State University, Columbus 43210, USA.

出版信息

Am J Hum Genet. 1995 Jul;57(1):22-33.

PMID:7611292
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1801231/
Abstract

Duchenne and Becker muscular dystrophies (DMD and BMD) are caused by defects in the dystrophin gene. About two-thirds of the affected patients have large deletions or duplications, which occur in the 5' and central portion of the gene. The nondeletion/duplication cases are most likely the result of smaller mutations that cannot be identified by current diagnostic screening strategies. We screened approximately 80% of the dystrophin coding sequence for small mutations in 158 patients without deletions or duplications and identified 29 mutations. The study indicates that many of the DMD and the majority of the BMD small mutations lie in noncoding regions of the gene. All of the mutations identified were unique to single patients, and most of the mutations resulted in protein truncation. We did not find a clustering of small mutations similar to the deletion distribution but found > 40% of the small mutations 3' of exon 55. The extent of protein truncation caused by the 3' mutations did not determine the phenotype, since even the exon 76 nonsense mutation resulted in the severe DMD phenotype. Our study confirms that the dystrophin gene is subject to a high rate of mutation in CpG sequences. As a consequence of not finding any hotspots or prevalent small mutations, we conclude that it is presently not possible to perform direct carrier and prenatal diagnostics for many families without deletions or duplications.

摘要

杜兴氏和贝克氏肌营养不良症(DMD和BMD)由肌营养不良蛋白基因缺陷引起。约三分之二的患病患者存在大片段缺失或重复,这些发生在基因的5'端和中部。非缺失/重复病例很可能是目前诊断筛查策略无法识别的较小突变导致的。我们在158例无缺失或重复的患者中筛查了约80%的肌营养不良蛋白编码序列以寻找小突变,并鉴定出29个突变。该研究表明,许多DMD和大多数BMD小突变位于基因的非编码区。所有鉴定出的突变都是单个患者所特有的,并且大多数突变导致蛋白质截短。我们没有发现类似于缺失分布的小突变聚集现象,但发现超过40%的小突变位于外显子55的3'端。3'端突变导致的蛋白质截短程度并不能决定表型,因为即使是外显子76无义突变也导致严重的DMD表型。我们的研究证实,肌营养不良蛋白基因在CpG序列中突变率很高。由于未发现任何热点或普遍存在的小突变,我们得出结论,目前对于许多无缺失或重复的家庭来说,无法进行直接的携带者和产前诊断。

相似文献

1
Spectrum of small mutations in the dystrophin coding region.肌营养不良蛋白编码区小突变的谱系
Am J Hum Genet. 1995 Jul;57(1):22-33.
2
Identification of two point mutations and a one base deletion in exon 19 of the dystrophin gene by heteroduplex formation.
Hum Mol Genet. 1993 Mar;2(3):311-3. doi: 10.1093/hmg/2.3.311.
3
A missense mutation in the dystrophin gene in a Duchenne muscular dystrophy patient.一名杜氏肌营养不良症患者肌营养不良蛋白基因中的错义突变。
Nat Genet. 1993 Aug;4(4):357-60. doi: 10.1038/ng0893-357.
4
Point mutation and polymorphism in Duchenne/Becker muscular dystrophy (D/BMD) patients.杜兴/贝克型肌营养不良症(D/BMD)患者的点突变和多态性。
Exp Mol Med. 2001 Dec 31;33(4):251-6. doi: 10.1038/emm.2001.41.
5
Detection of an exon 53 polymorphism in the dystrophin gene.肌营养不良蛋白基因外显子53多态性的检测
Hum Genet. 1993 Oct 1;92(3):302-4. doi: 10.1007/BF00244477.
6
Heteroduplex analysis of the dystrophin gene: application to point mutation and carrier detection.
Am J Med Genet. 1994 Mar 1;50(1):68-73. doi: 10.1002/ajmg.1320500115.
7
Point mutations at the carboxy terminus of the human dystrophin gene: implications for an association with mental retardation in DMD patients.人类肌营养不良蛋白基因羧基末端的点突变:对杜氏肌营养不良症患者智力发育迟缓相关性的影响。
Hum Mol Genet. 1993 Nov;2(11):1877-81. doi: 10.1093/hmg/2.11.1877.
8
Exon 44 nonsense mutation in two-Duchenne muscular dystrophy brothers detected by heteroduplex analysis.
Hum Mutat. 1993;2(3):192-5. doi: 10.1002/humu.1380020307.
9
[Detection of extensive deletions and duplications in the dystrophin gene].
Cas Lek Cesk. 1997 Mar 12;136(5):148-50.
10
Mutation analysis of the dystrophin gene in Southern French DMD or BMD families: from Southern blot to protein truncation test.法国南部杜氏或贝克型肌营养不良症(DMD或BMD)家族中抗肌萎缩蛋白基因的突变分析:从Southern印迹法到蛋白质截短试验
Hum Genet. 1998 Mar;102(3):334-42. doi: 10.1007/s004390050702.

引用本文的文献

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Total RNA-seq as a Tool to Study DMD Splicing and Transcriptional Dynamics.全RNA测序作为研究杜氏肌营养不良症剪接和转录动力学的工具
Methods Mol Biol. 2026;2975:17-36. doi: 10.1007/978-1-0716-4811-7_2.
2
Natural history of Becker muscular dystrophy: a multicenter study of 225 patients.贝克型肌营养不良症的自然病史:225 例患者的多中心研究。
Ann Clin Transl Neurol. 2023 Dec;10(12):2360-2372. doi: 10.1002/acn3.51925. Epub 2023 Oct 26.
3
NGS-based targeted sequencing identified six novel variants in patients with Duchenne/Becker muscular dystrophy from southwestern China.

本文引用的文献

1
Genomic organization of exons 22 to 25 of the dystrophin gene.肌营养不良蛋白基因外显子22至25的基因组结构
Hum Mol Genet. 1993 May;2(5):593-4. doi: 10.1093/hmg/2.5.593.
2
Evidence to implicate translation by ribosomes in the mechanism by which nonsense codons reduce the nuclear level of human triosephosphate isomerase mRNA.核糖体翻译参与无义密码子降低人磷酸丙糖异构酶mRNA核水平机制的证据。
Proc Natl Acad Sci U S A. 1993 Jan 15;90(2):482-6. doi: 10.1073/pnas.90.2.482.
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A missense mutation in the dystrophin gene in a Duchenne muscular dystrophy patient.
基于 NGS 的靶向测序在中国西南部的杜氏/贝克型肌营养不良症患者中鉴定出六个新的变异体。
BMC Med Genomics. 2023 May 30;16(1):121. doi: 10.1186/s12920-023-01556-1.
4
Specificities of the DMD Gene Mutation Spectrum in Russian Patients.俄罗斯患者 DMD 基因突变谱的特点。
Int J Mol Sci. 2022 Oct 22;23(21):12710. doi: 10.3390/ijms232112710.
5
Morpholino Oligomer-Induced Dystrophin Isoforms to Map the Functional Domains in the Dystrophin Protein.吗啉代寡聚物诱导的肌营养不良蛋白异构体用于定位肌营养不良蛋白中的功能结构域。
Mol Ther Nucleic Acids. 2020 Aug 21;22:263-272. doi: 10.1016/j.omtn.2020.08.019. eCollection 2020 Dec 4.
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Modelling Duchenne muscular dystrophy in MYOD1-converted urine-derived cells treated with 3-deazaneplanocin A hydrochloride.用盐酸 3-去氮杂胞苷处理 MYOD1 转化的尿液来源细胞建立杜氏肌营养不良症模型。
Sci Rep. 2019 Mar 7;9(1):3807. doi: 10.1038/s41598-019-40421-z.
7
Deletions, not duplications or small mutations, are the predominante new mutations in the dystrophin gene.缺失而非重复或小突变,是肌营养不良蛋白基因中的主要新突变。
J Hum Genet. 2017 Oct;62(10):885-888. doi: 10.1038/jhg.2017.70. Epub 2017 Jul 6.
8
Aminoglycosides, but not PTC124 (Ataluren), rescue nonsense mutations in the leptin receptor and in luciferase reporter genes.氨基糖苷类抗生素,但不是 PTC124(阿替洛尔),可挽救瘦素受体和荧光素酶报告基因中的无义突变。
Sci Rep. 2017 Apr 21;7(1):1020. doi: 10.1038/s41598-017-01093-9.
9
Evaluation of point mutations in dystrophin gene in Iranian Duchenne and Becker muscular dystrophy patients: introducing three novel variants.伊朗杜兴氏和贝克氏肌肉营养不良患者中肌营养不良蛋白基因突变的评估:发现三个新变体。
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10
High throughput screening in duchenne muscular dystrophy: from drug discovery to functional genomics.杜氏肌营养不良症的高通量筛选:从药物发现到功能基因组学
Biology (Basel). 2014 Nov 14;3(4):752-80. doi: 10.3390/biology3040752.
一名杜氏肌营养不良症患者肌营养不良蛋白基因中的错义突变。
Nat Genet. 1993 Aug;4(4):357-60. doi: 10.1038/ng0893-357.
4
A novel nonsense mutation in the human dystrophin gene.人类肌营养不良蛋白基因中的一种新型无义突变。
Hum Mutat. 1993;2(4):314-6. doi: 10.1002/humu.1380020413.
5
Exon 44 nonsense mutation in two-Duchenne muscular dystrophy brothers detected by heteroduplex analysis.
Hum Mutat. 1993;2(3):192-5. doi: 10.1002/humu.1380020307.
6
Point mutations at the carboxy terminus of the human dystrophin gene: implications for an association with mental retardation in DMD patients.人类肌营养不良蛋白基因羧基末端的点突变:对杜氏肌营养不良症患者智力发育迟缓相关性的影响。
Hum Mol Genet. 1993 Nov;2(11):1877-81. doi: 10.1093/hmg/2.11.1877.
7
A novel point mutation (G-1 to T) in a 5' splice donor site of intron 13 of the dystrophin gene results in exon skipping and is responsible for Becker muscular dystrophy.肌营养不良蛋白基因第13内含子5'剪接供体位点的一个新的点突变(G-1至T)导致外显子跳跃,是贝克型肌营养不良症的病因。
Am J Hum Genet. 1994 Jan;54(1):53-61.
8
Identification of a point mutation and germinal mosaicism in a Duchenne muscular dystrophy family.杜氏肌营养不良症家族中一个点突变和生殖系嵌合体的鉴定。
Hum Mutat. 1994;3(2):133-40. doi: 10.1002/humu.1380030208.
9
DXS997 localized to intron 48 of dystrophin.DXS997定位于肌营养不良蛋白的第48内含子。
Hum Mol Genet. 1993 Dec;2(12):2199. doi: 10.1093/hmg/2.12.2199.
10
On the origin of deletions and point mutations in Duchenne muscular dystrophy: most deletions arise in oogenesis and most point mutations result from events in spermatogenesis.关于杜氏肌营养不良症中缺失和点突变的起源:大多数缺失发生在卵子发生过程中,而大多数点突变是由精子发生过程中的事件导致的。
J Med Genet. 1994 Mar;31(3):183-6. doi: 10.1136/jmg.31.3.183.