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与MgADP·BeFx和MgADP·AlF4-复合的盘基网柄菌肌球蛋白运动结构域的X射线结构

X-ray structures of the myosin motor domain of Dictyostelium discoideum complexed with MgADP.BeFx and MgADP.AlF4-.

作者信息

Fisher A J, Smith C A, Thoden J B, Smith R, Sutoh K, Holden H M, Rayment I

机构信息

Institute for Enzyme Research, Department of Biochemistry, University of Wisconsin, Madison 53705, USA.

出版信息

Biochemistry. 1995 Jul 18;34(28):8960-72. doi: 10.1021/bi00028a004.

Abstract

The three-dimensional structures of the truncated myosin head from Dictyostelium discoideum myosin II complexed with beryllium and aluminum fluoride and magnesium ADP are reported at 2.0 and 2.6 A resolution, respectively. Crystals of the beryllium fluoride-MgADP complex belong to space group P2(1)2(1)2 with unit cell parameters of a = 105.3 A, b = 182.6 A, and c = 54.7 A, whereas the crystals of the aluminum fluoride complex belong to the orthorhombic space group C222(1) with unit cell dimensions of a = 87.9 A, b = 149.0 A, and c = 153.8 A. Chemical modification was not necessary to obtain these crystals. These structures reveal the location of the nucleotide complexes and define the amino acid residues that form the active site. The tertiary structure of the protein complexed with MgADP.BeFx is essentially identical to that observed previously in the three-dimensional model of chicken skeletal muscle myosin subfragment-1 in which no nucleotide was present. By contrast, the complex with MgADP.AlF4- exhibits significant domain movements. The structures suggest that the MgADP.BeFx complex mimics the ATP bound state and the MgADP.AlF4- complex is an analog of the transition state for hydrolysis. The domain movements observed in the MgADP.AlF4- complex indicate that myosin undergoes a conformational change during hydrolysis that is not associated with the nucleotide binding pocket but rather occurs in the COOH-terminal segment of the myosin motor domain.

摘要

分别报道了与铍、氟化铝和镁ADP复合的盘基网柄菌肌球蛋白II截短肌球蛋白头部在2.0埃和2.6埃分辨率下的三维结构。氟化铍-MgADP复合物的晶体属于空间群P2(1)2(1)2,晶胞参数为a = 105.3埃,b = 182.6埃,c = 54.7埃,而氟化铝复合物的晶体属于正交空间群C222(1),晶胞尺寸为a = 87.9埃,b = 149.0埃,c = 153.8埃。获得这些晶体无需进行化学修饰。这些结构揭示了核苷酸复合物的位置,并确定了形成活性位点的氨基酸残基。与MgADP.BeFx复合的蛋白质的三级结构与先前在不存在核苷酸的鸡骨骼肌肌球蛋白亚片段-1三维模型中观察到的结构基本相同。相比之下,与MgADP.AlF4-复合的结构表现出显著的结构域运动。这些结构表明,MgADP.BeFx复合物模拟了ATP结合状态,而MgADP.AlF4-复合物是水解过渡态的类似物。在MgADP.AlF4-复合物中观察到的结构域运动表明,肌球蛋白在水解过程中发生了构象变化,这种变化与核苷酸结合口袋无关,而是发生在肌球蛋白运动结构域的COOH末端片段中。

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