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人类角蛋白K4和K5的等位基因变异在12号染色体上的II型角蛋白基因簇内提供了多态性标记。

Allelic variations of human keratins K4 and K5 provide polymorphic markers within the type II keratin gene cluster on chromosome 12.

作者信息

Wanner R, Förster H H, Tilmans I, Mischke D

机构信息

Institut für Experimentelle Onkologie und Transplantationsmedizin, Universitätsklinikum Rudolf Virchow, Freie Universität Berlin, F.R.G.

出版信息

J Invest Dermatol. 1993 Jun;100(6):735-41. doi: 10.1111/1523-1747.ep12475671.

DOI:10.1111/1523-1747.ep12475671
PMID:7684424
Abstract

To appreciate point mutations in keratin genes as causes for hereditary epithelial diseases, the normal variation of these gene sequences in the population must be known. Because genetic polymorphism of keratins at the protein level due to allelic variation has been described for the type II keratins 4 and 5, we have analyzed their corresponding genes using single-strand conformation polymorphism gel electrophoresis and sequence analysis of polymerase chain reaction amplified genomic DNA. Although no sequence variations were found in the carboxyl-terminal and rod domains we were able to map the molecular differences among the alleles to their amino-terminal domains. In particular, we have identified three alleles of keratin 4. Two alleles differed by a nucleotide transition causing a neutral amino acid substitution (alanine to valine) and one allele had a 42-bp in-frame deletion corresponding to 14 amino acids within the V1 subdomain. Three alleles were also recognized for the keratin 5 locus, all being elicited by single nucleotide substitutions. Of these, only one altered the amino acid sequence, replacing an uncharged (glycine) with a charged (glutamic acid) amino acid in the H1 subdomain. Pedigree analyses in three families showed the alleles to be inherited as autosomal Mendelian traits. Thus, these normal alleles of keratins 4 and 5 will provide favorable polymorphic markers for linkage analysis directly within the cluster of type II keratin genes located on chromosome 12q to elucidate the potential involvement of these and other keratin genes in disorders of squamous cell differentiation.

摘要

为了认识角蛋白基因中的点突变是遗传性上皮疾病的病因,必须了解这些基因序列在人群中的正常变异情况。由于已经报道了Ⅱ型角蛋白4和5在蛋白质水平上因等位基因变异而产生的遗传多态性,我们使用单链构象多态性凝胶电泳和聚合酶链反应扩增的基因组DNA序列分析,对它们相应的基因进行了分析。虽然在羧基末端和杆状结构域未发现序列变异,但我们能够将等位基因之间的分子差异定位到它们的氨基末端结构域。特别是,我们鉴定出了角蛋白4的三个等位基因。两个等位基因因核苷酸转换而不同,导致中性氨基酸替代(丙氨酸替代缬氨酸),一个等位基因有一个42bp的框内缺失,对应于V1亚结构域内的14个氨基酸。角蛋白5基因座也识别出三个等位基因,均由单核苷酸替代引起。其中只有一个改变了氨基酸序列,在H1亚结构域中用带电荷的(谷氨酸)氨基酸替代了不带电荷的(甘氨酸)氨基酸。对三个家族的系谱分析表明,这些等位基因作为常染色体孟德尔性状遗传。因此,角蛋白4和5的这些正常等位基因将为直接在位于12q染色体上的Ⅱ型角蛋白基因簇内进行连锁分析提供有利的多态性标记,以阐明这些和其他角蛋白基因在鳞状细胞分化障碍中的潜在作用。

相似文献

1
Allelic variations of human keratins K4 and K5 provide polymorphic markers within the type II keratin gene cluster on chromosome 12.人类角蛋白K4和K5的等位基因变异在12号染色体上的II型角蛋白基因簇内提供了多态性标记。
J Invest Dermatol. 1993 Jun;100(6):735-41. doi: 10.1111/1523-1747.ep12475671.
2
The two size alleles of human keratin 1 are due to a deletion in the glycine-rich carboxyl-terminal V2 subdomain.人类角蛋白1的两种大小等位基因是由于富含甘氨酸的羧基末端V2亚结构域中的一个缺失所致。
J Invest Dermatol. 1992 Dec;99(6):697-702. doi: 10.1111/1523-1747.ep12614149.
3
The region coding for the helix termination motif and the adjacent intron 6 of the human type I hair keratin gene hHa2 contains three natural, closely spaced polymorphic sites.人类I型毛发角蛋白基因hHa2中编码螺旋终止基序的区域以及相邻的内含子6包含三个天然的、紧密相邻的多态性位点。
J Invest Dermatol. 1996 Mar;106(3):544-8. doi: 10.1111/1523-1747.ep12343976.
4
Extensive size polymorphism of the human keratin 10 chain resides in the C-terminal V2 subdomain due to variable numbers and sizes of glycine loops.由于甘氨酸环数量和大小的变化,人角蛋白10链的广泛大小多态性存在于C端V2亚结构域中。
Proc Natl Acad Sci U S A. 1992 Feb 1;89(3):910-4. doi: 10.1073/pnas.89.3.910.
5
Allele frequencies and segregation of human polymorphic keratins K4 and K5.人类多态性角蛋白K4和K5的等位基因频率及分离情况
Am J Hum Genet. 1990 Mar;46(3):548-52.
6
Organization of the human keratin type II gene cluster at 12q13.位于12q13的人类II型角蛋白基因簇的组织形式。
Genomics. 1994 Dec;24(3):502-8. doi: 10.1006/geno.1994.1659.
7
Embryonic simple epithelial keratins 8 and 18: chromosomal location emphasizes difference from other keratin pairs.胚胎期简单上皮角蛋白8和18:染色体定位凸显其与其他角蛋白对的差异。
New Biol. 1990 May;2(5):464-78.
8
Linkage of epidermolytic hyperkeratosis to the type II keratin gene cluster on chromosome 12q.表皮松解性角化过度与12号染色体长臂上的II型角蛋白基因簇的连锁关系。
Nat Genet. 1992 Jul;1(4):301-5. doi: 10.1038/ng0792-301.
9
Identification of a leucine-to-proline mutation in the keratin 5 gene in a family with the generalized Köbner type of epidermolysis bullosa simplex.在一个患有泛发型单纯性大疱性表皮松解症Köbner型的家族中,对角蛋白5基因中亮氨酸至脯氨酸突变的鉴定。
Hum Mutat. 1993;2(2):94-102. doi: 10.1002/humu.1380020206.
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Characterization of new members of the human type II keratin gene family and a general evaluation of the keratin gene domain on chromosome 12q13.13.人类II型角蛋白基因家族新成员的特征分析以及12q13.13染色体上角蛋白基因结构域的综合评估
J Invest Dermatol. 2005 Mar;124(3):536-44. doi: 10.1111/j.0022-202X.2004.23530.x.

引用本文的文献

1
Gene targeting at the mouse cytokeratin 10 locus: severe skin fragility and changes of cytokeratin expression in the epidermis.针对小鼠细胞角蛋白10基因座的基因靶向:严重的皮肤脆性和表皮中细胞角蛋白表达的变化。
J Cell Biol. 1996 Mar;132(5):925-36. doi: 10.1083/jcb.132.5.925.