Asmara W, Murdiyatmo U, Baines A J, Bull A T, Hardman D J
International Institute of Biotechnology, University of Kent, Canterbury, U.K.
Biochem J. 1993 May 15;292 ( Pt 1)(Pt 1):69-74. doi: 10.1042/bj2920069.
The chemical modification of L-2-haloacid halidohydrolase IVa (Hdl IVa), originally identified in Pseudomonas cepacia MBA4, produced as a recombinant protein in Escherichia coli DH5 alpha, led to the identification of histidine and arginine as amino acid residues likely to play a part in the catalytic mechanism of the enzyme. These results, together with DNA sequence and analyses [Murdiyatmo, Asmara, Baines, Bull and Hardman (1992) Biochem. J. 284, 87-93] provided the basis for the rational design of a series of random- and site-directed-mutagenesis experiments of the Hdl IVa structural gene (hdl IVa). Subsequent apparent kinetic analyses of purified mutant enzymes identified His-20 and Arg-42 as the key residues in the activity of this halidohydrolase. It is also proposed that Asp-18 is implicated in the functioning of the enzyme, possibly by positioning the correct tautomer of His-20 for catalysis in the enzyme-substrate complex and stabilizing the protonated form of His-20 in the transition-state complex. Comparison of conserved amino acid sequences between the Hdl IVa and other halidohydrolases suggests that L-2-haloacid halidohydrolases contain conserved amino acid sequences that are not found in halidohydrolases active towards both D- and L-2-monochloropropionate.
最初在洋葱伯克霍尔德菌MBA4中发现的L-2-卤代酸卤代水解酶IVa(Hdl IVa),作为重组蛋白在大肠杆菌DH5α中产生,其化学修饰导致鉴定出组氨酸和精氨酸是可能在该酶催化机制中起作用的氨基酸残基。这些结果,连同DNA序列和分析[穆尔迪亚托莫、阿斯玛拉、贝恩斯、布尔和哈德曼(1992年)《生物化学杂志》284卷,87 - 93页]为对Hdl IVa结构基因(hdl IVa)进行一系列随机和定点诱变实验的合理设计提供了基础。随后对纯化的突变酶进行的表观动力学分析确定His-20和Arg-42是该卤代水解酶活性中的关键残基。还提出Asp-18与该酶的功能有关,可能是通过在酶 - 底物复合物中为His-20的催化定位正确的互变异构体,并在过渡态复合物中稳定His-20的质子化形式。对Hdl IVa与其他卤代水解酶之间保守氨基酸序列的比较表明,L-2-卤代酸卤代水解酶含有在对D-和L-2-一氯丙酸均有活性的卤代水解酶中未发现的保守氨基酸序列。