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A parsimonay analysis of eukaryotic small subunit ribosomal RNA ("18 S") sequences.

作者信息

Arrotin P, Demoulin V

机构信息

Départment de Botanique, Université de Liège, Belgium.

出版信息

Arch Int Physiol Biochim Biophys. 1993 May-Jun;101(3):221-6. doi: 10.3109/13813459309046479.

DOI:10.3109/13813459309046479
PMID:7691217
Abstract

Using the principles of Felsenstein's DNA parsimony analysis program (package PHYLIP 3.2), a program with the capacity to handle data sets of the magnitude of ss rRNA has been developed. With this program we applied an heuristic approach to 83 s rRNA sequences from the Antwerp data bank, compared along 4230 positions of their alignment. Branch and bound can also be applied to a smaller number of sequences. We suggest a heuristic tree for a large number of species might be more interesting than a proven minimal tree for a smaller set of species. Comparisons are also made with earlier studies using distance matrix methods; caution is urged for deciding on the evolutionary position of widely divergent groups, whatever the tree building technique used.

摘要

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