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哺乳动物和植物中存在tRNA假基因而酵母中不存在,这可能解释了前体tRNA加工酶的不同特异性。

The presence of tRNA pseudogenes in mammalia and plants and their absence in yeast may account for different specificities of pre-tRNA processing enzymes.

作者信息

Kaçar Y, Beier H, Gross H J

机构信息

Institut für Biochemie, Bayerische Julius-Maximilians-Universität, Würzburg, Germany.

出版信息

Gene. 1995 Apr 14;156(1):129-32. doi: 10.1016/0378-1119(95)00079-l.

DOI:10.1016/0378-1119(95)00079-l
PMID:7737506
Abstract

Six of 13 cloned members of the human tRNA(Val) gene family code for tRNA(Val) pseudogenes, of which all but one are transcribed efficiently in HeLa cell extracts. Due to single or multiple mismatches in stem regions, the corresponding pre-tRNAs are resistant against the action of human 5'- and 3'-processing enzymes and are thus prevented from being converted to mature tRNAs. Surprisingly, all of them are accurately and efficiently processed to mature-sized tRNA in yeast nuclear extract. This is in agreement with corresponding studies of plant pre-tRNAs which are not processed in wheat germ extract but are rapidly processed in yeast extract. These observations imply that the yeast pre-tRNA 5'- and 3'-maturases do not monitor the three-dimensional structure of their substrates as stringently as mammalian and plant enzymes, possibly because tRNA pseudogenes do not occur in yeast.

摘要

人类tRNA(Val)基因家族的13个克隆成员中有6个编码tRNA(Val)假基因,其中除一个外,其他在HeLa细胞提取物中均能高效转录。由于茎区存在单个或多个错配,相应的前体tRNA对人类5'-和3'-加工酶的作用具有抗性,因此无法转化为成熟的tRNA。令人惊讶的是,所有这些假基因在酵母核提取物中都能准确、高效地加工成成熟大小的tRNA。这与植物前体tRNA的相应研究结果一致,植物前体tRNA在小麦胚芽提取物中不被加工,但在酵母提取物中能快速加工。这些观察结果表明,酵母前体tRNA 5'-和3'-成熟酶对底物三维结构的监测不像哺乳动物和植物酶那样严格,这可能是因为酵母中不存在tRNA假基因。

相似文献

1
The presence of tRNA pseudogenes in mammalia and plants and their absence in yeast may account for different specificities of pre-tRNA processing enzymes.哺乳动物和植物中存在tRNA假基因而酵母中不存在,这可能解释了前体tRNA加工酶的不同特异性。
Gene. 1995 Apr 14;156(1):129-32. doi: 10.1016/0378-1119(95)00079-l.
2
Expression of variant nuclear Arabidopsis tRNA(Ser) genes and pre-tRNA maturation differ in HeLa, yeast and wheat germ extracts.拟南芥变异型细胞核tRNA(Ser)基因的表达及前体tRNA成熟在人宫颈癌HeLa细胞、酵母和麦胚提取物中存在差异。
Mol Gen Genet. 1992 May;233(1-2):201-8. doi: 10.1007/BF00587580.
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The first human genes for tRNA(ArgICG), tRNA(GlyUCC), and tRNA(ThrIGU) and more tRNA(Val) pseudogenes: expression and pre-tRNA maturation in HeLa cell-free extracts.首个tRNA(精氨酸ICG)、tRNA(甘氨酸UCC)和tRNA(苏氨酸IGU)的人类基因以及更多tRNA(缬氨酸)假基因:HeLa无细胞提取物中的表达及前体tRNA成熟过程
DNA Cell Biol. 1992 Dec;11(10):781-90. doi: 10.1089/dna.1992.11.781.
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Endonucleolytic cleavage of a long 3'-trailer sequence in a nuclear yeast suppressor tRNA.核酵母抑制性tRNA中长3'尾序列的核酸内切酶切割
Biochemistry. 1992 Nov 10;31(44):10817-24. doi: 10.1021/bi00159a024.
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Genes, variant genes and pseudogenes of the human tRNA(Val) gene family. Expression and pre-tRNA maturation in vitro.人类tRNA(Val)基因家族的基因、变异基因和假基因。体外表达及前体tRNA成熟
J Mol Biol. 1989 Oct 20;209(4):505-23. doi: 10.1016/0022-2836(89)90590-1.
6
Intron excision from tRNA precursors by plant splicing endonuclease requires unique features of the mature tRNA domain.植物剪接内切核酸酶从tRNA前体中切除内含子需要成熟tRNA结构域的独特特征。
Eur J Biochem. 1992 Nov 15;210(1):193-203. doi: 10.1111/j.1432-1033.1992.tb17408.x.
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Genes, variant genes, and pseudogenes of the human tRNA(Val) gene family are differentially expressed in HeLa cells and in human placenta.
Nucleic Acids Res. 1990 Sep 11;18(17):5001-8. doi: 10.1093/nar/18.17.5001.
8
An efficiently transcribed human tRNA(Val) gene variant produces a stable pre-tRNA: repair of the processing defect by in vitro mutations.一个转录效率高的人类tRNA(Val)基因变体产生稳定的前体tRNA:通过体外突变修复加工缺陷。
DNA. 1989 Jan-Feb;8(1):51-8. doi: 10.1089/dna.1.1989.8.51.
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Expression of nuclear tRNA(Tyr) genes from Arabidopsis thaliana in HeLa cell and wheat germ extracts.拟南芥核tRNA(Tyr)基因在HeLa细胞和小麦胚芽提取物中的表达
Plant Mol Biol. 1991 May;16(5):865-75. doi: 10.1007/BF00015078.
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A cell-free plant extract for accurate pre-tRNA processing, splicing and modification.一种用于精确进行前体tRNA加工、剪接和修饰的无细胞植物提取物。
EMBO J. 1987 Sep;6(9):2811-8. doi: 10.1002/j.1460-2075.1987.tb02577.x.

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PLoS One. 2008 Feb 20;3(2):e1622. doi: 10.1371/journal.pone.0001622.
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The tRNATyr-isoacceptors and their genes in the ciliate Tetrahymena thermophila: cytoplasmic tRNATyr has a QPsiA anticodon and is coded by multiple intron-containing genes.嗜热四膜虫中tRNATyr同工受体及其基因:细胞质tRNATyr具有QPsiA反密码子,由多个含内含子的基因编码。
Nucleic Acids Res. 1997 Nov 1;25(21):4194-200. doi: 10.1093/nar/25.21.4194.
3
Nucleotide sequences of nuclear tRNA(Cys) genes from Nicotiana and Arabidopsis and expression in HeLa cell extract.
烟草和拟南芥细胞核tRNA(半胱氨酸)基因的核苷酸序列及其在HeLa细胞提取物中的表达。
Plant Mol Biol. 1996 Nov;32(3):549-52. doi: 10.1007/BF00019108.