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杂合性广泛缺失导致人类淋巴母细胞中17号染色体上的突变率存在差异。

Extensive loss of heterozygosity accounts for differential mutation rate on chromosome 17q in human lymphoblasts.

作者信息

Dobo K L, Giver C R, Eastmond D A, Rumbos H S, Grosovsky A J

机构信息

Environmental Toxicology Graduate Program, University of California, Riverside 92521, USA.

出版信息

Mutagenesis. 1995 Jan;10(1):53-8. doi: 10.1093/mutage/10.1.53.

DOI:10.1093/mutage/10.1.53
PMID:7739402
Abstract

In order to investigate the influence of loss of heterozygosity (LOH) events on mutation rate, we studied two closely related human lymphoblastoid cell lines, AHH-1 (h2E1.v2) and MCL-5, which are heterozygous at the tk locus (chromosome 17q23-25). Although they have similar mutant fractions at the hprt locus, the mutant fraction and rate at tk is four to five times higher in AHH-1. Analysis of 58 spontaneous TK- mutants from AHH-1 and MCL-5 showed that the occurrence of LOH events was more frequent (23/24) in AHH-1 than MCL-5 (16/34). A set of five microsatellite polymorphism loci was used to map the extent of LOH along chromosome 17q. In AHH-1 cells, 15/23 of the LOH events encompassed at least 35% of the sex-averaged genetic length of chromosome 17q (98 cM). Additionally, the next most extensive category of LOH accounted for 5/23 TK- mutants, and encompassed at least 17 cM. In contrast, LOH events observed in MCL-5 are very restricted in extent; only one LOH tract extended as far as 4 cM from tk. The higher mutation rate at tk in AHH-1 can, therefore, be entirely attributed to the recovery of chromosomal scale LOH in viable, normal growth TK- mutants. Furthermore, these data demonstrate that the regional potential for LOH is likely to be an important determinant of mutation rate for loci within that chromosomal segment.

摘要

为了研究杂合性缺失(LOH)事件对突变率的影响,我们研究了两种密切相关的人类淋巴母细胞系,AHH-1(h2E1.v2)和MCL-5,它们在tk基因座(染色体17q23 - 25)处为杂合子。尽管它们在hprt基因座处具有相似的突变率,但AHH-1中tk的突变率和突变频率要高四到五倍。对来自AHH-1和MCL-5的58个自发TK-突变体的分析表明,AHH-1中LOH事件的发生频率(23/24)高于MCL-5(16/34)。一组五个微卫星多态性位点用于绘制沿染色体17q的LOH范围。在AHH-1细胞中,23个LOH事件中有15个涵盖了至少35%的染色体17q性平均遗传长度(98 cM)。此外,下一个最广泛的LOH类别占23个TK-突变体中的5个,涵盖至少17 cM。相比之下,在MCL-5中观察到的LOH事件范围非常有限;只有一个LOH片段从tk延伸到4 cM。因此,AHH-1中tk较高的突变率可以完全归因于在存活的正常生长的TK-突变体中染色体规模的LOH的恢复。此外,这些数据表明,LOH的区域可能性可能是该染色体片段内基因座突变率的重要决定因素。

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Interchromosomal gene conversion at an endogenous human cell locus.人类内源性细胞位点的染色体间基因转换
Genetics. 2001 Jun;158(2):757-67. doi: 10.1093/genetics/158.2.757.
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Single and coincident intragenic mutations attributable to gene conversion in a human cell line.人类细胞系中由基因转换导致的单个和同时发生的基因内突变。
Genetics. 1997 Aug;146(4):1429-39. doi: 10.1093/genetics/146.4.1429.