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使用mant-核苷酸探测肌球蛋白活性位点的构象。

The conformation of the active site of myosin probed using mant-nucleotides.

作者信息

Franks-Skiba K, Cooke R

机构信息

Department of Biochemistry and Biophysics, University of California, San Francisco 94143-0448, USA.

出版信息

Biophys J. 1995 Apr;68(4 Suppl):142S-147S; discussion 147S-149S.

Abstract

Changes in the conformation of the active site of myosin subfragment-1 (S1) may be linked to the production of force during the powerstroke. We probed the conformation of the nucleotide pocket by measuring the solvent accessibility of bound mant-nucleotides. Solvent accessibility was determined by measuring the quenching of fluorescence produced by the solvent phase quencher acrylamide. The fluorescent mant moiety is attached to the ribose and is located near the outside of the pocket where it is likely to be sensitive to opening of the pocket. MantADP was highly protected from the quencher when bound to the active site of S1. A similar degree of protection was also observed for mantATP during steady-state hydrolysis by S1, and for mantADP bound to acto-S1 or to myosin in myofibrils. Assuming that S1-mantATP and actoS1-mantADP represent states at the beginning and the end of the powerstroke, respectively, we conclude that the myosin nucleotide pocket does not undergo a large conformational change during the powerstroke. However, the high degree of protection seen for mant-nucleotides is not easily explained by the open structure of the nucleotide pocket in the S1-nucleotide complex observed by x-ray diffraction.

摘要

肌球蛋白亚片段-1(S1)活性位点构象的变化可能与动力冲程期间力的产生有关。我们通过测量结合的mant-核苷酸的溶剂可及性来探究核苷酸口袋的构象。溶剂可及性通过测量溶剂相淬灭剂丙烯酰胺产生的荧光淬灭来确定。荧光mant部分连接在核糖上,位于口袋外部附近,在那里它可能对口袋的打开敏感。当mantADP与S1的活性位点结合时,它受到淬灭剂的高度保护。在S1进行稳态水解期间,对于mantATP,以及对于结合在肌动蛋白-S1或肌原纤维中的肌球蛋白上的mantADP,也观察到了类似程度的保护。假设S1-mantATP和肌动蛋白-S1-mantADP分别代表动力冲程开始和结束时的状态,我们得出结论,在动力冲程期间,肌球蛋白核苷酸口袋不会发生大的构象变化。然而,通过X射线衍射观察到的S1-核苷酸复合物中核苷酸口袋的开放结构,很难解释mant-核苷酸所表现出的高度保护。

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