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剪接体A复合体的纯化及其电子显微镜观察

Purification of the spliceosome A-complex and its visualization by electron microscopy.

作者信息

Furman E, Glitz D G

机构信息

Department of Biological Chemistry, UCLA School of Medicine, University of California 90024-1737, USA.

出版信息

J Biol Chem. 1995 Jun 30;270(26):15515-22. doi: 10.1074/jbc.270.26.15515.

DOI:10.1074/jbc.270.26.15515
PMID:7797545
Abstract

Pre-mRNA splicing occurs on spliceosomes, a family of ribonucleoprotein particles. Spliceosome assembly on exogenous adenovirus pre-mRNA was blocked at the A-complex (or pre-spliceosome) stage, either by destruction of the small nuclear ribonucleoproteins (snRNPs) that comprise the U4/U5/U6 tri-snRNP complex, or by interference in tri-snRNP assembly and interactions. The A-complex was isolated by size exclusion chromatography; homogeneity was shown by electrophoresis in nondenaturing polyacrylamide gels, gradient sedimentation, and electron microscopy. Northern hybridization showed U1 and U2 snRNAs to be present in the preparation, but not U4, U5, or U6. Antibodies specific for a component of the U1 snRNP or for a component that is common to all snRNPs (except U6) each precipitated an A-complex containing pre-mRNA, U1 and U2 snRNPs. Electron micrographs showed 230 x 270-A particles whose two components appear similar to individual U1 and U2 snRNPs. Electron micrographs of an A-complex-5'-biotinyl oligonucleotide-streptavidin-gold composite allowed identification of the U2 snRNP within the structure and the localization of the 5'-segment of U2 snRNA at a unique site in the A-complex. This region of U2 RNA is adjacent to the developing catalytic center of the spliceosome.

摘要

前体mRNA剪接发生在剪接体上,剪接体是一类核糖核蛋白颗粒。外源性腺病毒前体mRNA上的剪接体组装在A复合体(或前剪接体)阶段被阻断,这要么是通过破坏构成U4/U5/U6三小核核糖核蛋白复合体(tri-snRNP)的小核核糖核蛋白(snRNP),要么是通过干扰三小核核糖核蛋白的组装和相互作用来实现的。通过尺寸排阻色谱法分离出A复合体;通过非变性聚丙烯酰胺凝胶电泳、梯度沉降和电子显微镜显示其均一性。Northern杂交显示制备物中存在U1和U2 snRNA,但不存在U4、U5或U6。针对U1 snRNP的一个组分或所有snRNP(U6除外)共有的一个组分的特异性抗体,各自沉淀出一个包含前体mRNA、U1和U2 snRNP的A复合体。电子显微镜照片显示出230×270埃的颗粒,其两个组分看起来类似于单个的U1和U2 snRNP。A复合体-5'-生物素化寡核苷酸-链霉亲和素-金复合物的电子显微镜照片使得能够在结构内鉴定U2 snRNP,并将U2 snRNA的5'-片段定位在A复合体中的一个独特位点。U2 RNA的这个区域与剪接体正在形成的催化中心相邻。

相似文献

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Purification of the spliceosome A-complex and its visualization by electron microscopy.剪接体A复合体的纯化及其电子显微镜观察
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Prespliceosome structure provides insights into spliceosome assembly and regulation.前剪接体结构为剪接体的组装和调控提供了线索。
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Structure of a pre-catalytic spliceosome.催化前剪接体的结构
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Association of U2, U4, U5, and U6 small nuclear ribonucleoproteins in a spliceosome-type complex in absence of precursor RNA.在无前体RNA的情况下,U2、U4、U5和U6小核核糖核蛋白在剪接体样复合物中的关联。
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The nuclear cap-binding complex interacts with the U4/U6·U5 tri-snRNP and promotes spliceosome assembly in mammalian cells.核帽结合复合物与 U4/U6·U5 三 snRNP 相互作用,并促进哺乳动物细胞剪接体的组装。
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A 69-kD protein that associates reversibly with the Sm core domain of several spliceosomal snRNP species.一种69-kD蛋白,它与几种剪接体snRNP种类的Sm核心结构域可逆结合。
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A novel yeast U2 snRNP protein, Snu17p, is required for the first catalytic step of splicing and for progression of spliceosome assembly.一种新型酵母U2小核核糖核蛋白(snRNP)蛋白Snu17p是剪接的第一步催化反应以及剪接体组装进程所必需的。
Mol Cell Biol. 2001 May;21(9):3037-46. doi: 10.1128/MCB.21.9.3037-3046.2001.

引用本文的文献

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Molecular Mechanisms of pre-mRNA Splicing through Structural Biology of the Spliceosome.通过剪接体的结构生物学研究前体 mRNA 剪接的分子机制。
Cold Spring Harb Perspect Biol. 2019 Jan 2;11(1):a032409. doi: 10.1101/cshperspect.a032409.
2
Isolation and accumulation of spliceosomal assembly intermediates.剪接体组装中间体的分离与积累
Methods Mol Biol. 2014;1126:179-92. doi: 10.1007/978-1-62703-980-2_14.
3
Conformational dynamics of single pre-mRNA molecules during in vitro splicing.体外剪接过程中单前体 mRNA 分子的构象动力学。
Nat Struct Mol Biol. 2010 Apr;17(4):504-12. doi: 10.1038/nsmb.1767. Epub 2010 Mar 21.
4
Linking splicing to Pol II transcription stabilizes pre-mRNAs and influences splicing patterns.将剪接与RNA聚合酶II转录相联系可稳定前体信使核糖核酸并影响剪接模式。
PLoS Biol. 2006 Jun;4(6):e147. doi: 10.1371/journal.pbio.0040147. Epub 2006 May 2.
5
Proximity of the U12 snRNA with both the 5' splice site and the branch point during early stages of spliceosome assembly.在剪接体组装早期,U12 snRNA与5'剪接位点和分支点的接近程度。
Mol Cell Biol. 2005 Jun;25(12):4813-25. doi: 10.1128/MCB.25.12.4813-4825.2005.
6
In situ transcription and splicing in the Balbiani ring 3 gene.巴尔比亚尼环3基因的原位转录与剪接
EMBO J. 2001 May 15;20(10):2564-74. doi: 10.1093/emboj/20.10.2564.
7
Ultrastructural and functional analyses of recombinant influenza virus ribonucleoproteins suggest dimerization of nucleoprotein during virus amplification.重组流感病毒核糖核蛋白的超微结构和功能分析表明,在病毒扩增过程中核蛋白会发生二聚化。
J Virol. 2000 Jan;74(1):156-63. doi: 10.1128/jvi.74.1.156-163.2000.
8
Initial recognition of U12-dependent introns requires both U11/5' splice-site and U12/branchpoint interactions.对U12依赖型内含子的初始识别需要U11/5'剪接位点和U12/分支点相互作用。
Genes Dev. 1999 Apr 1;13(7):851-63. doi: 10.1101/gad.13.7.851.