Kato M, Makino R, Iizuka T
Institute of Physical and Chemical Research (RIKEN), Saitama, Japan.
Biochim Biophys Acta. 1995 Jan 19;1246(2):178-84. doi: 10.1016/0167-4838(94)00197-o.
The CO-binding kinetics of cytochrome P-450cam(+) and P-450cam(-) have been measured in the millisecond time domain using a flash photolysis method. We have determined the reaction coordinates for free energy, enthalpy and entropy from the temperature dependence of the overall rate constants of the bimolecular forward (on) and backward (off) reactions. Comparing the thermodynamic profiles of P-450cam with that of myoglobin (Mb) reported so far, the enthalpy and the entropy coordinates exhibit the following remarkable characteristics. The CO-binding equilibrium: The stability of the CO-complex is perfectly entropy-driven for P-450cam, while enthalpy-driven for Mb. This entropy-driven feature for P-450cam is enhanced by the dissociating d-camphor. The on and off activation processes: The on and off reactions for P-450cam are dominantly controlled by the enthalpy and entropy terms, respectively, while those for Mb are rather the reverse of the case of P-450cam. The dissociation of d-camphor has a significant effect on the on reaction but no effect on the off reaction. Analyzing these thermodynamic features on the basis of the physical chemistry in the solution reaction, it was found that these characteristic profiles arise from the difference in the global structural change between the proteins. Namely, during the equilibrium process of the CO binding, this structural change is accompanied by a larger increase in the degree of freedom in P-450cam than in Mb. We discussed the correlations between the structural changes and their biological significance.
已使用闪光光解方法在毫秒时间域中测量了细胞色素P - 450cam(+)和P - 450cam(-)与一氧化碳(CO)结合的动力学。我们根据双分子正向(结合)和反向(解离)反应的总速率常数的温度依赖性,确定了自由能、焓和熵的反应坐标。将P - 450cam的热力学曲线与迄今报道的肌红蛋白(Mb)的热力学曲线进行比较,焓和熵坐标呈现出以下显著特征。CO结合平衡:对于P - 450cam,CO复合物的稳定性完全由熵驱动,而对于Mb则由焓驱动。P - 450cam的这种熵驱动特征因d - 樟脑的解离而增强。结合和解离活化过程:P - 450cam的结合和解离反应分别主要由焓项和熵项控制,而Mb的情况则与P - 450cam相反。d - 樟脑的解离对结合反应有显著影响,但对解离反应没有影响。基于溶液反应中的物理化学分析这些热力学特征,发现这些特征曲线源于蛋白质之间全局结构变化的差异。也就是说,在CO结合的平衡过程中,P - 450cam中这种结构变化伴随着比Mb更大的自由度增加。我们讨论了结构变化与其生物学意义之间的相关性。