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在串联阵列中发生重组或转换时,可能会出现长度保守性和互易性的丧失。

Possible loss of length conservation and reciprocity during recombination or conversion in tandem arrays.

作者信息

Fletcher H L

机构信息

School of Biology and Biochemistry, Queens University of Belfast, United Kingdom.

出版信息

Genetics. 1994 Oct;138(2):511-8. doi: 10.1093/genetics/138.2.511.

DOI:10.1093/genetics/138.2.511
PMID:7828832
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1206167/
Abstract

Recombination or conversion between arrays of repeated sequences need not be conservative for length because two single strands of DNA from one chromatid may form heteroduplexes in different registers on the other participating duplex. This can cause an overall change in repeat number. Loss of length conservation is equally possible whether models of recombination initiated by single-strand transfer or double-strand break are applicable. Length changing conversion will frequently produce a characteristic insertion within a deletion, often appearing as a double deletion such as are frequently found in new variants of human minisatellite MS32. There is no apparent means of preserving parity during length-changing conversion or recombination, and if the changes are biased then the overall copy number will increase or decrease according to that bias. The observation that arrays persist suggests that any bias in these arrays will be toward gains. An equilibrium may be reached where gains, which may be largely independent of array length, equal losses from the array-length-dependent processes of intrachromatid recombination and repeated unequal sister chromatid exchanges.

摘要

重复序列阵列之间的重组或转换在长度上不一定是保守的,因为来自一条染色单体的两条单链DNA可能在另一条参与的双链体上以不同的对齐方式形成异源双链体。这可能导致重复数目的总体变化。无论单链转移引发的重组模型还是双链断裂引发的重组模型是否适用,长度保守性的丧失同样是可能的。长度改变的转换常常会在缺失中产生一个特征性的插入,通常表现为双缺失,就像在人类小卫星MS32的新变体中经常发现的那样。在长度改变的转换或重组过程中,没有明显的方法来保持奇偶性,如果这些变化存在偏差,那么总体拷贝数将根据该偏差增加或减少。阵列持续存在的观察结果表明,这些阵列中的任何偏差都将倾向于增加。可能会达到一种平衡,其中增加(这可能在很大程度上与阵列长度无关)等于来自染色单体内重组和重复的不等姐妹染色单体交换的与阵列长度相关过程的损失。

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本文引用的文献

1
Ends-in vs. ends-out recombination in yeast.酵母中的端对端与端向外重组
Genetics. 1993 Dec;135(4):973-80. doi: 10.1093/genetics/135.4.973.
2
The effects of unequal sister chromatid exchange on length of arrays of repeated sequences.不等姐妹染色单体交换对重复序列阵列长度的影响。
J Theor Biol. 1993 Oct 21;164(4):507-14. doi: 10.1006/jtbi.1993.1169.
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The double-strand-break repair model for recombination.用于重组的双链断裂修复模型。
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Persistence of tandem arrays: implications for satellite and simple-sequence DNAs.串联阵列的持久性:对卫星DNA和简单序列DNA的影响
Genetics. 1987 Mar;115(3):553-67. doi: 10.1093/genetics/115.3.553.
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Use of a ring chromosome and pulsed-field gels to study interhomolog recombination, double-strand DNA breaks and sister-chromatid exchange in yeast.利用环状染色体和脉冲场凝胶研究酵母中的同源重组、双链DNA断裂和姐妹染色单体交换。
Genetics. 1989 Dec;123(4):695-713. doi: 10.1093/genetics/123.4.695.
9
Repeat unit sequence variation in minisatellites: a novel source of DNA polymorphism for studying variation and mutation by single molecule analysis.小卫星中的重复单位序列变异:通过单分子分析研究变异和突变的新型DNA多态性来源。
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