• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

血管性血友病因子A结构域的蛋白质折叠预计与在人类ras-p21中发现的由α螺旋侧翼的开放扭曲β折叠相似。

The protein fold of the von Willebrand factor type A domain is predicted to be similar to the open twisted beta-sheet flanked by alpha-helices found in human ras-p21.

作者信息

Edwards Y J, Perkins S J

机构信息

Department of Biochemistry and Molecular Biology, Royal Free Hospital School of Medicine, London, UK.

出版信息

FEBS Lett. 1995 Jan 30;358(3):283-6. doi: 10.1016/0014-5793(94)01447-9.

DOI:10.1016/0014-5793(94)01447-9
PMID:7843416
Abstract

The von Willebrand Factor type A domain is the prototype for a protein superfamily. It possesses no significant sequence similarity to any known protein structure. Secondary structure predictions indicate a largely alternating pattern of six alpha-helices and six beta-strands. A protein fold for this domain is proposed to correspond to a doubly-wound open twisted beta-sheet structure flanked by alpha-helices. Close agreement was found with the GTP-binding domain of human ras-p21, provided that an extra alpha-helix was inserted. The structure of the predicted fold showed high compatibility with the proximate location of two Mg(2+)-binding Asp residues, two disulphide-bridged Cys residues, and other known functional attributes of this domain.

摘要

血管性血友病因子 A 结构域是一个蛋白质超家族的原型。它与任何已知的蛋白质结构都没有显著的序列相似性。二级结构预测表明,它主要是由六个α螺旋和六个β链交替排列组成。该结构域的蛋白质折叠被认为对应于一种两侧有α螺旋的双缠绕开放扭曲β折叠结构。如果插入一个额外的α螺旋,则发现它与人类ras-p21的GTP结合结构域高度一致。预测折叠结构与该结构域两个结合Mg(2+)的天冬氨酸残基、两个二硫键连接的半胱氨酸残基的临近位置以及其他已知功能属性具有高度兼容性。

相似文献

1
The protein fold of the von Willebrand factor type A domain is predicted to be similar to the open twisted beta-sheet flanked by alpha-helices found in human ras-p21.血管性血友病因子A结构域的蛋白质折叠预计与在人类ras-p21中发现的由α螺旋侧翼的开放扭曲β折叠相似。
FEBS Lett. 1995 Jan 30;358(3):283-6. doi: 10.1016/0014-5793(94)01447-9.
2
Assessment of protein fold predictions from sequence information: the predicted alpha/beta doubly wound fold of the von Willebrand factor type A domain is similar to its crystal structure.基于序列信息的蛋白质折叠预测评估:血管性血友病因子A结构域预测的α/β双缠绕折叠与其晶体结构相似。
J Mol Biol. 1996 Jul 12;260(2):277-85. doi: 10.1006/jmbi.1996.0398.
3
The secondary structure of the von Willebrand factor type A domain in factor B of human complement by Fourier transform infrared spectroscopy. Its occurrence in collagen types VI, VII, XII and XIV, the integrins and other proteins by averaged structure predictions.通过傅里叶变换红外光谱法研究人补体因子B中血管性血友病因子A结构域的二级结构。通过平均结构预测其在VI型、VII型、XII型和XIV型胶原蛋白、整合素及其他蛋白质中的存在情况。
J Mol Biol. 1994 Apr 22;238(1):104-19. doi: 10.1006/jmbi.1994.1271.
4
Structural analysis of peptides encompassing all alpha-helices of three alpha/beta parallel proteins: Che-Y, flavodoxin and P21-ras: implications for alpha-helix stability and the folding of alpha/beta parallel proteins.对包含三种α/β平行蛋白(Che-Y、黄素氧还蛋白和P21-ras)所有α螺旋的肽段进行结构分析:对α螺旋稳定性及α/β平行蛋白折叠的意义
J Mol Biol. 1995 Apr 7;247(4):648-69. doi: 10.1016/s0022-2836(05)80145-7.
5
Metal-dependent conformational changes in a recombinant vWF-A domain from human factor B: a solution study by circular dichroism, fourier transform infrared and (1)H NMR spectroscopy.人补体因子B重组vWF-A结构域中金属依赖性构象变化:圆二色光谱、傅里叶变换红外光谱和¹H核磁共振光谱的溶液研究
J Mol Biol. 2000 Apr 21;298(1):135-47. doi: 10.1006/jmbi.2000.3632.
6
Oncogenic amino acid substitutions in the inhibitory rap-1A protein cause it to adopt a ras-p21-like conformation as computed using molecular dynamics.抑制性rap - 1A蛋白中的致癌氨基酸取代使其呈现出类似ras - p21的构象,这是通过分子动力学计算得出的。
J Biomol Struct Dyn. 1996 Jun;13(6):925-33. doi: 10.1080/07391102.1996.10508907.
7
Protein fold recognition by mapping predicted secondary structures.通过映射预测的二级结构进行蛋白质折叠识别。
J Mol Biol. 1996 Jun 14;259(3):349-65. doi: 10.1006/jmbi.1996.0325.
8
Structural model of the ATP-binding domain of the F1-beta subunit based on analogy to the RecA protein.基于与RecA蛋白的类比构建的F1-β亚基ATP结合结构域的结构模型。
FEBS Lett. 1994 Aug 29;351(1):1-5. doi: 10.1016/0014-5793(94)00796-9.
9
Primary structure of the propeptide and factor VIII-binding domain of bovine von Willebrand factor.
Biochim Biophys Acta. 1997 Apr 25;1339(1):4-8. doi: 10.1016/s0167-4838(97)00043-5.
10
Comparison of the predicted structures of loops in the ras-SOS protein bound to a single ras-p21 protein with the crystallographically determined structures in SOS bound to two ras-p21 proteins.将与单个ras-p21蛋白结合的ras-SOS蛋白中环的预测结构与晶体学确定的与两个ras-p21蛋白结合的SOS中的结构进行比较。
Protein J. 2005 Aug;24(6):391-8. doi: 10.1007/s10930-005-7593-3.

引用本文的文献

1
Feature architecture aware phylogenetic profiling indicates a functional diversification of type IVa pili in the nosocomial pathogen Acinetobacter baumannii.特征结构感知系统发育分析表明,医院病原体鲍曼不动杆菌的 IVa 型菌毛在功能上呈现多样化。
PLoS Genet. 2023 Jul 27;19(7):e1010646. doi: 10.1371/journal.pgen.1010646. eCollection 2023 Jul.
2
Structure and interactions of the archaeal motility repression module ArnA-ArnB that modulates archaellum gene expression in .古菌运动抑制模块 ArnA-ArnB 的结构和相互作用,该模块调节. 中的菌毛基因表达。
J Biol Chem. 2019 May 3;294(18):7460-7471. doi: 10.1074/jbc.RA119.007709. Epub 2019 Mar 22.
3
A three-way inter-molecular network accounts for the Caα2δ1-induced functional modulation of the pore-forming Ca1.2 subunit.
三向分子网络解释了 Caα2δ1 对形成孔的 Ca1.2 亚基的功能调节作用。
J Biol Chem. 2018 May 11;293(19):7176-7188. doi: 10.1074/jbc.RA118.001902. Epub 2018 Mar 27.
4
Molecular modeling of the von Willebrand factor A2 Domain and the effects of associated type 2A von Willebrand disease mutations.血管性血友病因子A2结构域的分子建模及相关2A型血管性血友病突变的影响
J Mol Model. 2004 Aug;10(4):259-70. doi: 10.1007/s00894-004-0194-9. Epub 2004 Aug 3.
5
Bioinformatics methods to predict protein structure and function. A practical approach.预测蛋白质结构和功能的生物信息学方法。一种实用方法。
Mol Biotechnol. 2003 Feb;23(2):139-66. doi: 10.1385/MB:23:2:139.
6
Production and functional activity of a recombinant von Willebrand factor-A domain from human complement factor B.人补体因子B重组血管性血友病因子A结构域的产生及功能活性
Biochem J. 1999 Sep 15;342 Pt 3(Pt 3):625-32.
7
Predicted structure of the extracellular region of ligand-gated ion-channel receptors shows SH2-like and SH3-like domains forming the ligand-binding site.配体门控离子通道受体细胞外区域的预测结构显示,SH2样和SH3样结构域形成了配体结合位点。
Protein Sci. 1997 May;6(5):983-98. doi: 10.1002/pro.5560060504.
8
Folding of the beta-propeller domain of the integrin alphaL subunit is independent of the I domain and dependent on the beta2 subunit.整合素αL亚基β-螺旋桨结构域的折叠不依赖于I结构域,而是依赖于β2亚基。
Proc Natl Acad Sci U S A. 1997 Apr 1;94(7):3162-7. doi: 10.1073/pnas.94.7.3162.
9
A proposed architecture for the central domain of the bacterial enhancer-binding proteins based on secondary structure prediction and fold recognition.基于二级结构预测和折叠识别的细菌增强子结合蛋白中心结构域的一种提议架构。
Protein Sci. 1997 Mar;6(3):543-55. doi: 10.1002/pro.5560060304.
10
Folding of the N-terminal, ligand-binding region of integrin alpha-subunits into a beta-propeller domain.整联蛋白α亚基的N端配体结合区域折叠成β-螺旋桨结构域。
Proc Natl Acad Sci U S A. 1997 Jan 7;94(1):65-72. doi: 10.1073/pnas.94.1.65.