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对线性延伸的DNA进行高分辨率荧光原位杂交,直观地绘制出与面肩肱型肌营养不良相关的串联重复序列,该序列紧邻4q端粒。

High resolution fluorescence in situ hybridization to linearly extended DNA visually maps a tandem repeat associated with facioscapulohumeral muscular dystrophy immediately adjacent to the telomere of 4q.

作者信息

Bengtsson U, Altherr M R, Wasmuth J J, Winokur S T

机构信息

Department of Biological Chemistry, University of California, Irvine 92717.

出版信息

Hum Mol Genet. 1994 Oct;3(10):1801-5. doi: 10.1093/hmg/3.10.1801.

DOI:10.1093/hmg/3.10.1801
PMID:7849703
Abstract

Facioscapulohumeral muscular dystrophy (FSHD) is an autosomal dominant neuromuscular disorder. The FSHD locus has been linked to the most distal genetic markers on the long arm of chromosome 4. An EcoRI fragment length polymorphism segregates with the disease in most FSHD families. Within the EcoRI fragment lies a tandem array of 3.2 kb repeats. Deletions of integral copies of this repeat have been associated with the disease. The 3.2 kbp repeat has recently been shown to cross-hybridize to several regions of heterochromatin in the human genome and DNA sequence analysis reveals strong homology to a class of heterochromatin repeats, LSau. In this report, we demonstrate that the 3.2 kbp tandem repeat lies adjacent to a subtelomeric sequence, which is within 5-14 kb of the telomeric repeat (TTAGGG)n. Direct visual fluorescence hybridization to linearly extended strands of DNA enabled the visualization of this subtelomeric sequence as a short string of signals at the end of a longer string of signals from the differentially labeled 3.2 kbp tandem repeat. Furthermore, in support of our data showing that the 3.2 kbp repeat lies in close proximity to the telomere of 4q, we demonstrated the lack of hybridization of total human DNA to this same region. Our results indicate that the tandem array of 3.2 kbp repeats, disrupted in FSHD, lies immediately adjacent to the telomere of 4q and that the gene responsible for FSHD is likely located proximal to the tandem repeat.

摘要

面肩肱型肌营养不良症(FSHD)是一种常染色体显性神经肌肉疾病。FSHD基因座与4号染色体长臂上最远端的遗传标记相关联。在大多数FSHD家族中,一种EcoRI片段长度多态性与该疾病共分离。在EcoRI片段内存在一个3.2 kb重复序列的串联阵列。该重复序列的完整拷贝缺失与该疾病相关。最近发现,3.2 kbp重复序列与人基因组中几个异染色质区域发生交叉杂交,DNA序列分析显示其与一类异染色质重复序列LSau具有高度同源性。在本报告中,我们证明3.2 kbp串联重复序列位于一个亚端粒序列附近,该亚端粒序列距离端粒重复序列(TTAGGG)n 5 - 14 kb。对线性延伸的DNA链进行直接视觉荧光杂交,能够将该亚端粒序列可视化为来自差异标记的3.2 kbp串联重复序列的较长信号串末端的一小串信号。此外,为支持我们的数据表明3.2 kbp重复序列紧邻4q端粒,我们证明了总人类DNA与同一区域缺乏杂交。我们的结果表明,在FSHD中被破坏的3.2 kbp重复序列串联阵列紧邻4q端粒,并且导致FSHD的基因可能位于串联重复序列的近端。

相似文献

1
High resolution fluorescence in situ hybridization to linearly extended DNA visually maps a tandem repeat associated with facioscapulohumeral muscular dystrophy immediately adjacent to the telomere of 4q.对线性延伸的DNA进行高分辨率荧光原位杂交,直观地绘制出与面肩肱型肌营养不良相关的串联重复序列,该序列紧邻4q端粒。
Hum Mol Genet. 1994 Oct;3(10):1801-5. doi: 10.1093/hmg/3.10.1801.
2
The DNA rearrangement associated with facioscapulohumeral muscular dystrophy involves a heterochromatin-associated repetitive element: implications for a role of chromatin structure in the pathogenesis of the disease.与面肩肱型肌营养不良相关的DNA重排涉及一种异染色质相关的重复元件:对染色质结构在该疾病发病机制中的作用的启示。
Chromosome Res. 1994 May;2(3):225-34. doi: 10.1007/BF01553323.
3
Monosomy of distal 4q does not cause facioscapulohumeral muscular dystrophy.4号染色体长臂远端单体性不会导致面肩肱型肌营养不良症。
J Med Genet. 1996 May;33(5):366-70. doi: 10.1136/jmg.33.5.366.
4
The evolutionary distribution and structural organization of the homeobox-containing repeat D4Z4 indicates a functional role for the ancestral copy in the FSHD region.
Hum Mol Genet. 1996 Oct;5(10):1567-75. doi: 10.1093/hmg/5.10.1567.
5
Molecular genetics of facioscapulohumeral muscular dystrophy (FSHD).面肩肱型肌营养不良症(FSHD)的分子遗传学
Neuromuscul Disord. 1997 Jan;7(1):55-62. doi: 10.1016/s0960-8966(96)00400-2.
6
Identification of the first gene (FRG1) from the FSHD region on human chromosome 4q35.在人类染色体4q35上的面肩肱型肌营养不良(FSHD)区域中首个基因(FRG1)的鉴定。
Hum Mol Genet. 1996 May;5(5):581-90. doi: 10.1093/hmg/5.5.581.
7
The Facioscapulohumeral muscular dystrophy region on 4qter and the homologous locus on 10qter evolved independently under different evolutionary pressure.位于4号染色体长臂末端的面肩肱型肌营养不良区域和位于10号染色体长臂末端的同源位点在不同的进化压力下独立进化。
BMC Med Genet. 2007 Mar 2;8:8. doi: 10.1186/1471-2350-8-8.
8
Inter- and intrachromosomal sub-telomeric rearrangements on 4q35: implications for facioscapulohumeral muscular dystrophy (FSHD) aetiology and diagnosis.4q35上的染色体间和染色体内亚端粒重排:对面肩肱型肌营养不良症(FSHD)病因学和诊断的影响
Hum Mol Genet. 1998 Aug;7(8):1207-14. doi: 10.1093/hmg/7.8.1207.
9
Hybridization analysis of D4Z4 repeat arrays linked to FSHD.与面肩肱型肌营养不良症相关的D4Z4重复序列阵列的杂交分析。
Chromosoma. 2007 Apr;116(2):107-16. doi: 10.1007/s00412-006-0080-6. Epub 2006 Nov 28.
10
FSHD associated DNA rearrangements are due to deletions of integral copies of a 3.2 kb tandemly repeated unit.与面肩肱型肌营养不良症(FSHD)相关的DNA重排是由于一个3.2 kb串联重复单元的完整拷贝缺失所致。
Hum Mol Genet. 1993 Dec;2(12):2037-42. doi: 10.1093/hmg/2.12.2037.

引用本文的文献

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Skelet Muscle. 2025 Aug 25;15(1):24. doi: 10.1186/s13395-025-00388-0.
2
A NHE3-related pseudogene is on human Chromosome 10; the functional gene maps to 5pl5.3.
Mamm Genome. 1996 Mar;7(3):235-6. doi: 10.1007/s003359900066.
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4
Ophthalmic manifestations of inherited neurodegenerative disorders.遗传性神经退行性疾病的眼部表现。
Nat Rev Neurol. 2014 Jun;10(6):349-62. doi: 10.1038/nrneurol.2014.79. Epub 2014 May 20.
5
miR-411 is up-regulated in FSHD myoblasts and suppresses myogenic factors.miR-411 在 FSHD 成肌细胞中上调,并抑制成肌因子。
Orphanet J Rare Dis. 2013 Apr 5;8:55. doi: 10.1186/1750-1172-8-55.
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Analysis of the organisation and localisation of the FSHD-associated tandem array in primates: implications for the origin and evolution of the 3.3 kb repeat family.灵长类动物中与面肩肱型肌营养不良相关串联重复序列的组织与定位分析:对3.3 kb重复序列家族起源与进化的启示
Chromosoma. 1996 Sep;105(3):180-9. doi: 10.1007/BF02509499.
7
Monosomy of distal 4q does not cause facioscapulohumeral muscular dystrophy.4号染色体长臂远端单体性不会导致面肩肱型肌营养不良症。
J Med Genet. 1996 May;33(5):366-70. doi: 10.1136/jmg.33.5.366.