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甘氨酸212在嗜热脂肪芽孢杆菌磷酸果糖激酶变构行为中的作用

Role of glycine 212 in the allosteric behavior of phosphofructokinase from Bacillus stearothermophilus.

作者信息

Zhu X, Byrnes M, Nelson J W, Chang S H

机构信息

Department of Biochemistry, Louisiana State University, Baton Rouge 70803.

出版信息

Biochemistry. 1995 Feb 28;34(8):2560-5. doi: 10.1021/bi00008a021.

Abstract

Crystallographic studies indicate that the loop between alpha-helix 8 and beta-strand H (the 8H loop) which borders the effector site of Bacillus stearothermophilus phosphofructokinase (BsPFK) is involved in the allosteric mechanism of the enzyme [Schirmer, T., and Evans, P.R. (1990) Nature 343, 140-145]. The residue at one end of this loop, glycine 212, has been proposed to be a pivot about which the loop hinges. Using site-directed mutagenesis, glycine 212 was replaced with valine (G212V). Steady-state kinetic analysis and ligand binding studies on the altered and native PFKs showed that the G212V substitution resulted in discernible changes at the effector site. The mutated PFK required a 3-fold higher concentration of the allosteric inhibitor phosphoenolpyruvate than did the native enzyme to cause the same level of inhibition. The altered PFK had a 2-fold higher dissociation constant for the allosteric activator GDP than the wild-type enzyme. More importantly, whereas the native PFK was fully activated by 1 mM GDP from its PEP-inhibited T-state, the altered enzyme was only marginally activated. On the other hand, the G212V mutation resulted in no changes at the catalytic site of BsPFK. The catalytic rate constant kcat remained unchanged. The altered PFK had the same Km values for ATP and fructose-6-phosphate (Fru-6-P) as did the wild-type enzyme. Furthermore, starting from the same PEP-inhibited T-state, both enzymes gave identical sigmoidal responses to increasing Fru-6-P concentration, indicating that Fru-6-P can activate both to the R-state.

摘要

晶体学研究表明,嗜热栖热芽孢杆菌磷酸果糖激酶(BsPFK)效应位点边界处的α-螺旋8和β-链H之间的环(8H环)参与了该酶的变构机制[施尔默,T.,和埃文斯,P.R.(1990年)《自然》343, 140 - 145]。该环一端的残基,即甘氨酸212,被认为是该环围绕其转动的支点。通过定点诱变,将甘氨酸212替换为缬氨酸(G212V)。对改变后的和天然的PFK进行稳态动力学分析和配体结合研究表明,G212V替换导致效应位点出现明显变化。与天然酶相比,突变后的PFK需要高三倍浓度的变构抑制剂磷酸烯醇丙酮酸才能产生相同程度的抑制。改变后的PFK对变构激活剂GDP的解离常数比野生型酶高两倍。更重要的是,虽然天然PFK在其被PEP抑制的T态下能被1 mM GDP完全激活,但改变后的酶仅被轻微激活。另一方面,G212V突变在BsPFK的催化位点未引起变化。催化速率常数kcat保持不变。改变后的PFK对ATP和6-磷酸果糖(Fru-6-P)的Km值与野生型酶相同。此外,从相同的被PEP抑制的T态开始,两种酶对增加的Fru-6-P浓度都给出相同的S形响应,表明Fru-6-P能将两者都激活到R态。

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