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残基161在两种细菌磷酸果糖激酶变构转变中的作用。

Role of residue 161 in the allosteric transitions of two bacterial phosphofructokinases.

作者信息

Auzat I, Byrnes W M, Garel J R, Chang S H

机构信息

Laboratoire d'Enzymologie du CNRS, 91198 Gif-sur-Yvette, France.

出版信息

Biochemistry. 1995 May 30;34(21):7062-8. doi: 10.1021/bi00021a018.

DOI:10.1021/bi00021a018
PMID:7766616
Abstract

The loop between alpha-helix 6 and beta-strand F of the phosphofructokinase (PFK) from Bacillus stearothermophilus is proposed to be important in the allosteric transition of the enzyme [Schirmer, T., & Evans, P.R. (1990) Nature 343, 140-145]. Except for residue 161, the amino acids within the loop are similar between B. stearothermophilus PFK (BsPFK) and the PFK from Escherichia coli (EcPFK). In the former enzyme, residue 161 is a glutamate, while in the latter it is a glutamine. We have used site-directed mutagenesis to investigate the importance of residue 161 for the allosteric regulation of the two enzymes by phosphoenolpyruvate (PEP), an inhibitor, and GDP, an activator. In BsPFK, glutamate 161 has been changed to a glutamine and an alanine, while in EcPFK, glutamine 161 has been changed to a glutamate, an arginine, and an alanine. The kinetic parameters of the mutant enzymes were similar to those of the respective wild types, indicating that residue 161 is not directly involved in substrate binding and catalysis. One of the EcPFK mutants, Q161A, though activated normally by GDP, was completely insensitive to PEP. This indicates that the hydrogen-bonding ability of residue 161 is critical for PEP inhibition of EcPFK and suggests that GDP activation and PEP inhibition follow different structural pathways in EcPFK. The BsPFK mutant enzymes were less sensitive to PEP inhibition and more sensitive to GDP activation, suggesting that inhibition and activation are opposed and follow a common structural pathway in agreement with a concerted allosteric mechanism.

摘要

嗜热脂肪芽孢杆菌磷酸果糖激酶(PFK)的α-螺旋6和β-链F之间的环被认为在该酶的变构转变中起重要作用[席尔默,T.,& 埃文斯,P.R.(1990年)《自然》343, 140 - 145]。除了161位残基外,嗜热脂肪芽孢杆菌PFK(BsPFK)和大肠杆菌PFK(EcPFK)中环内的氨基酸相似。在前一种酶中,161位残基是谷氨酸,而在后一种酶中是谷氨酰胺。我们利用定点诱变来研究161位残基对于两种酶被磷酸烯醇丙酮酸(PEP,一种抑制剂)和GDP(一种激活剂)变构调节的重要性。在BsPFK中,谷氨酸161已被替换为谷氨酰胺和丙氨酸,而在EcPFK中,谷氨酰胺161已被替换为谷氨酸、精氨酸和丙氨酸。突变酶的动力学参数与各自野生型的相似,表明161位残基不直接参与底物结合和催化。EcPFK突变体之一,Q161A,虽然能被GDP正常激活,但对PEP完全不敏感。这表明161位残基的氢键结合能力对于PEP抑制EcPFK至关重要,并表明在EcPFK中GDP激活和PEP抑制遵循不同的结构途径。BsPFK突变酶对PEP抑制的敏感性较低,对GDP激活的敏感性较高,这表明抑制和激活是相反的,并且遵循与协同变构机制一致的共同结构途径。

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Biochemistry. 2009 Dec 29;48(51):12323-8. doi: 10.1021/bi901456p.
2
Site-directed mutagenesis of the active site of diacylglycerol kinase alpha: calcium and phosphatidylserine stimulate enzyme activity via distinct mechanisms.二酰基甘油激酶α活性位点的定点诱变:钙和磷脂酰丝氨酸通过不同机制刺激酶活性。
Biochem J. 2003 Nov 1;375(Pt 3):673-80. doi: 10.1042/BJ20031052.
3
Reevaluation of the accepted allosteric mechanism of phosphofructokinase from Bacillus stearothermophilus.
嗜热脂肪芽孢杆菌磷酸果糖激酶公认的变构机制的重新评估。
Proc Natl Acad Sci U S A. 2000 Apr 11;97(8):3844-9. doi: 10.1073/pnas.050588097.