Benslimane A A, Rode A, Quétier F, Hartmann C
Département de Biologie, Faculté des Sciences Semlalia, Université Cadi Ayyad, Marrakech, Maroc.
Curr Genet. 1994 Nov-Dec;26(5-6):535-41. doi: 10.1007/BF00309946.
We report here the identification and characterization of two minicircular plasmid-like DNAs isolated from mitochondria of a moroccan date-palm variety. Both molecules were cloned and used as probes in Southern analyses of mitochondrial and total-cellular DNA. Evidence was obtained that these plasmid-like DNAs cross-hybridized but did not show any homology to nuclear, chloroplastic, or main mitochondrial genomes. Sequence analysis revealed that both minicircles, 1,346- and 1,160-bp long, share several stretches of homology, the most important consisting of three identical clusters of lengths 42, 47 and 38 bp. In contrast, no major homology was observed with the other higher-plant plasmid-like DNAs reported so far. Sequence analysis also revealed the presence, in the same strand of one of the minicircles, of two open reading frames potentially encoding proteins 89 and 86 amino acids in length. Interestingly, Northern analyses, using single strands of each minicircle as probes, showed the presence of two transcripts hybridizing only with the strand bearing these two open reading frames. However, computer-assisted comparison of the predicted polypeptide sequences with a protein-sequence library failed to detect any significant homology to known sequences.
我们在此报告从摩洛哥枣椰树品种的线粒体中分离出的两种类微小环状质粒DNA的鉴定和特征。这两种分子均被克隆,并用作线粒体DNA和总细胞DNA Southern分析中的探针。有证据表明,这些类质粒DNA发生了交叉杂交,但与核基因组、叶绿体基因组或主要线粒体基因组均无任何同源性。序列分析显示,两个长度分别为1346 bp和1160 bp的微小环状分子有几段同源序列,其中最重要的是由三个长度分别为42 bp、47 bp和38 bp的相同簇组成。相比之下,与迄今报道的其他高等植物类质粒DNA没有发现主要的同源性。序列分析还显示,在其中一个微小环状分子的同一条链上存在两个开放阅读框,可能编码长度分别为89个和86个氨基酸的蛋白质。有趣的是,以北分析中,用每个微小环状分子的单链作为探针,结果显示存在两种仅与携带这两个开放阅读框的链杂交的转录本。然而,通过计算机辅助将预测的多肽序列与蛋白质序列文库进行比较,未能检测到与已知序列有任何显著同源性。