Chakrabarti R, McCracken J B, Chakrabarti D, Souba W W
Department of Surgery, University of Florida, Gainesville 32610.
Gene. 1995 Feb 14;153(2):163-99. doi: 10.1016/0378-1119(94)00751-d.
A human genomic clone, psi GS, containing an intron-less glutamine synthetase (GS)-encoding pseudogene, was isolated by screening a human library. A sequence of 3004 bp, containing the GS coding region and both the 5' and 3' flanking sequences, was identified that exhibits all the characteristics of a processed pseudogene. The coding region shows 93% identity with the human GS cDNA (hGS) sequence and contains two frame-shifts and two termination codons. The coding sequence is flanked by a 9-bp AT repeat and a putative polyadenylation site, AATAAA, at the 3' end. Primer extension analysis and S1 nuclease mapping showed a transcription start point (tsp) 62 bp upstream from the start codon indicating a shorter untranslated region than hGS. Transfection of HeLa cells with cat constructs containing portions of the 5' flanking sequence showed the presence of a functional promoter/enhancer within 200 bp of the tsp, independent of its orientation.
通过筛选人类文库,分离出一个包含无内含子谷氨酰胺合成酶(GS)编码假基因的人类基因组克隆psi GS。鉴定出一段3004 bp的序列,其包含GS编码区以及5'和3'侧翼序列,该序列展现出加工假基因的所有特征。编码区与人类GS cDNA(hGS)序列具有93%的同一性,并且包含两个移码突变和两个终止密码子。编码序列两侧分别是一个9 bp的AT重复序列以及3'端的一个假定聚腺苷酸化位点AATAAA。引物延伸分析和S1核酸酶图谱分析显示,转录起始点(tsp)位于起始密码子上游62 bp处,表明其非翻译区比hGS短。用含有5'侧翼序列部分片段的cat构建体转染HeLa细胞,结果表明在tsp的200 bp范围内存在一个功能性启动子/增强子,且与其方向无关。